Aphelocoma coerulescens (scrub jay): 138100462
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Entry
138100462 CDS
T10543
Symbol
PAF1
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoe03021
]
138100462 (PAF1)
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
138100462 (PAF1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
138100462
NCBI-ProteinID:
XP_068854402
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All DBs
Position
34:787142..792248
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AA seq
521 aa
AA seq
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MAPTIQTQAQRDEPGHRPSSHRTLPERSGVVCRVKFCNSLPDIPFDPKFITYPFDQSRFV
QYKATSLEKQHKHDLLTEPDLGVTIDLINPDTYRIDPGVLLDPADEKLLEEEIQAPTSSK
RSQQHAKVVPWMRKTEYISTEFNRYGVSNEKPEVKIGVSVKQQFTEEEIYKDRDSQIAAI
EKTFEDAQKAITQHYSKPRVTPLEVMPVFPDFKMWINPCAQVIFDSDPAPKDTSGAAALE
MMSQAMIRGMMDEEGNQFVAYFLPVEETLRKRKRDQEEDVDYAPEDVYDYKIAREYNWNV
KNKASKGYEENYFFIFREGDGVYYNELETRVRLSKRRARAGVQSGTNAVLVVKHRDMNEK
ELEAQEARRAQLENHEPEEEEEEEMEAEKETPGSDEERDKGSESDEDEGSGSGSERGGGS
ARSEDEEEEEEEEEEAEGARGGRRGGSDAARAARDQEEIFGSDNDEEEEEEEEEEEEEEE
EEGSEGGGPAPHSPQLTPSEEEEEEEEEEESPSDGSESSSE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaccatccagacgcaggcgcagcgcgacgagccgggccaccggcccagctcg
caccggaccctccccgagaggtccggggtcgtttgccgggtcaagttctgcaacagcctc
ccggacatccccttcgaccccaagttcatcacgtaccccttcgaccagagcaggttcgtg
cagtacaaggcaacgtccctggagaagcagcacaagcacgacctcctgaccgagccggac
ctgggcgtcaccattgacctcatcaaccccgacacgtaccggatcgaccctggggtgctg
ctggaccctgcggacgagaagctgctggaggaggagatccaggctccaacgagctccaag
aggtcacagcagcacgccaaagtggtgccctggatgcgcaagaccgagtacatctccacc
gagttcaaccgctacggagtgtccaacgagaaacccgaggtcaagatcggtgtgtcggtg
aagcagcagttcacagaggaggagatctacaaggacagggacagtcagattgcagccatc
gagaaaaccttcgaagacgcccagaaagcgatcacgcagcactacagcaaaccccgggtg
acccccctggaggtgatgcctgtgttccccgacttcaagatgtggatcaacccctgtgcc
caagtgatttttgactcggacccagcccccaaggacacgtcgggggcggcggctctcgaa
atgatgtcccaggccatgatcagggggatgatggacgaggaggggaaccagtttgtggcc
tatttcctccctgtggaggaaacgctgcggaagcggaagcgggaccaggaggaggacgtg
gattacgcccccgaggatgtctatgactacaagattgcccgggagtacaactggaacgtg
aagaacaaggccagcaagggctacgaggagaattatttcttcatcttccgcgagggcgac
ggcgtctactacaacgagctggagaccagggtccggctgagcaagcgccgtgctcgcgcc
ggggtccagtcgggcaccaacgccgtgctggtggtcaagcaccgggacatgaatgagaag
gagctcgaggcccaggaggcccggcgggcgcagctggagaaccatgagcccgaggaggaa
gaggaggaggagatggaggcagagaaggaaacgccgggatcagacgaggagcgggacaag
ggcagcgagagcgacgaggacgaaggctccggctcgggctcggagcgcggggggggctcc
gcccgcagtgaggatgaagaggaggaggaggaggaggaggaggaggctgaaggtgcccgg
ggcggccgccgggggggcagcgacgccgctcgggccgcccgggaccaggaggagattttc
ggcagtgacaacgatgaggaagaagaggaggaggaagaggaagaggaggaggaggaagag
gaggaaggcagcgaggggggggggccagcaccccacagtcctcaactcacccccagcgag
gaggaggaggaggaagaggaggaggaggaaagtcccagcgatggctccgaatcctccagt
gaatga
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