Aphelocoma coerulescens (scrub jay): 138100500
Help
Entry
138100500 CDS
T10543
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03022
Basal transcription factors
acoe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138100500 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
138100500 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoe03021
]
138100500 (ERCC2)
03036 Chromosome and associated proteins [BR:
acoe03036
]
138100500 (ERCC2)
03400 DNA repair and recombination proteins [BR:
acoe03400
]
138100500 (ERCC2)
Enzymes [BR:
acoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
138100500 (ERCC2)
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
138100500 (ERCC2)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
138100500 (ERCC2)
DNA repair and recombination proteins [BR:
acoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
138100500 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
SesA
Motif
Other DBs
NCBI-GeneID:
138100500
NCBI-ProteinID:
XP_068854458
LinkDB
All DBs
Position
34:complement(471957..495716)
Genome browser
AA seq
758 aa
AA seq
DB search
MKLNVDGLLVLFPYEFIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYQ
RAHPLDVSKLIYCSRTVPEIEKVVEELRKLLQCYERELGQPLPFLGLALSSRKNLCVHPE
VSALRFGKEVDSRCLALTASYLRDPPEGPRASCAFFQEFEARGRQSPLPFGVHNLDDLRA
LGRQRGCCPYFLARSSLAQASAVVYSYHYLLDPKIAGLVSAELARSSVVVFDEAHNIDNV
CIEAMGVTLTRRTLDRCQANVGTLQSALQRVKESDSRRLADEYRRLVQGLREAGAARDSD
LLLANPVLPDEVLQEAVPGSIRAAEHFVGFLRRLVEQLRAQLRGPRVQQLSPPAFLRELR
ERVCIERKPLRFCAERLHSLLRTLALPDVADFSPITLVANFATLVSTYSKGFTIIIEPFE
ERAPSVANPVLHFCCLDASIAIRPVFERFQSVIVTSGTLSPLEFYPKILGFRPVTMATFS
MTLARTCLCPMIVGRGNDQVAMSSKFETREDIAVIRNYGQLLLELSAVVPDGLVAFFTSY
VYLESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAVLLSVARG
KVSEGVDFVHHYGRAVIMFGVPYVYTQSRILKARLEFLREQLQVREGEFLTFDAMRHAAQ
CVGRALRGKTDYGLMVFADKRFARADKRGKLPRWIQERLPESHLNLTVDEAVQAAKRFLR
EMAQPFRQEDQLGLSLLTWEQLQAGEVLQRIQGISQQL
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaacgtggacgggctcctggtgctgttcccctacgagttcatctaccccgag
cagttctcctacatgctggagctcaagcgcaccctggacgccaagggccacggggtgctg
gagatgccgtcgggcaccggcaaaacggtctcgctgctgtcgctgatcgtcgcctaccag
cgggcccaccccctggacgtctccaagctgatctactgctcgcgcaccgtgcccgagatc
gagaaggtggtggaggagctgcggaagctgctgcagtgctacgagcgggagctggggcag
ccgctgcccttcctggggctggcgctgagctcccgcaagaacctctgcgtgcaccccgag
gtgtcggcgctgcgcttcgggaaggaggtcgacagccgctgcctggccctgacggcctcg
tacctgcgggacccccccgagggcccccgggcctcctgcgccttcttccaggagttcgag
gcgcggggccggcagagccccctccccttcggggttcacaacctggacgatctccgggcc
ctcggccgccagcgcggctgctgcccctatttcctggcccgctcctcgctggcgcaggcc
agcgccgtggtgtacagctaccattacctgctggaccccaaaatcgccgggctggtgtcg
gccgagctcgcccgctcctcggtcgtggtgttcgacgaggcccacaacatcgacaacgtg
tgcatcgaggccatgggagtgaccctcacccgccggaccctggaccggtgccaggccaac
gtgggcaccctgcagagcgccctgcagcgggtgaaggagtcggactcgcggcgcctggcg
gacgagtaccggcgcctggtgcaggggctgcgcgaggccggcgccgcccgcgactccgac
ctgctcctggccaaccccgtcctgcccgacgaggtcctgcaggaggccgtcccgggcagc
atccgcgcggccgagcacttcgtgggcttcctgcggcgcctggtggagcagctgcgggcg
cagctgcgggggccccgcgtgcagcagctcagcccccccgccttcctgcgggagctgcgc
gagcgcgtctgcatcgagcgcaaacccctccggttctgtgccgagcgcctgcactccctg
ctccggaccctcgccctccccgacgtcgccgacttctcccccatcaccctcgtggccaac
ttcgccaccctcgtcagcacctacagcaagggcttcaccatcatcatcgagcccttcgag
gagcgagccccgagcgtcgccaaccccgtgctgcacttctgctgcttggacgcctcgatc
gccatcaggccggtgttcgagcgcttccagtcggtcatcgtcacctcggggactttatcc
cccctggaattctaccccaaaatcctggggttccgccccgttaccatggcaaccttcagc
atgacgctggctcggacctgcctgtgccccatgatcgtgggacgaggcaacgaccaggtg
gccatgagctccaagttcgagacccgcgaggacatcgcggtgatccggaactacgggcag
ctgctcctggagctctcggccgtggtccccgacggcctcgtggcctttttcaccagctac
gtctacctggagagcaccgtggcctcgtggtacgagcagggcatcctggagaacatccag
cggaacaagctgctcttcatcgagacccaggacggggccgagaccagcgtggccctggag
aagtaccaggaggcctgtgagaacggccgcggggccgtgctgctctcggtggcgcggggc
aaagtgtccgagggcgtcgattttgtccatcactacggccgggccgtgatcatgttcggg
gtcccctacgtttacacccagagccgcatcctcaaggcccggctggagttcctgcgggag
cagctgcaggtgcgcgagggggagttcctgaccttcgacgccatgcggcacgcggcgcag
tgcgtggggagagcgctgcgggggaaaaccgactacggattaatggtgtttgctgacaag
cgcttcgcccgggccgacaagcgggggaagctgccgcgctggatccaggagcggctcccc
gagtcccacctgaacctgaccgtggacgaggccgtgcaggcggccaagaggttcctgcgg
gagatggcccagcccttccggcaggaggatcagctggggctgtcgctgctgacgtgggag
cagctccaggccggggaggtgctgcagcggatccaggggatctcccagcagctctga
DBGET
integrated database retrieval system
