Aphelocoma coerulescens (scrub jay): 138100736
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Entry
138100736 CDS
T10543
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
138100736 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
acoe01007
]
138100736 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acoe03016
]
138100736 (VARS2)
Enzymes [BR:
acoe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
138100736 (VARS2)
Amino acid related enzymes [BR:
acoe01007
]
Aminoacyl-tRNA synthetase
Class I (U)
138100736 (VARS2)
Transfer RNA biogenesis [BR:
acoe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
138100736 (VARS2)
Prokaryotic type
138100736 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1_2
tRNA-synt_1g
tRNA-synt_1e
DUF1400
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
138100736
NCBI-ProteinID:
XP_068854701
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MQGWSVLWVPGTDHAGIATQAIVERWLWQHRGLRRQDLSRAEFLREVWHWKERHGDEILE
QLRALGASLDWSRCAFTMDPGFSRAVTEAFVRLFQAGLIRRDQRVVSWSCALRSALADVE
VEPRVLTGPTALSVPSCPHPVTFGLLVTFAYPVEGDEELELPVATTRPETIFGDVAVAVH
PRDPRYLHLHGRRVRHPFSGALLPVVTDPSVQPDLGTGAVKVTPGHSPQDLALARAHGLP
LLSVIGDDGTLCPPGGGWLQGVPRFEARARVVAALSQRGLVRGVQDHAMTLPLCSRSGDV
VEFLLKRQWFLSCGDMARAALEAVTSGRLRLVPKFHEKNWKTWMENAGDWCLSRQLWWGH
RVPAYQVRGGPVPGGPQEGPGGPPQEGPWFVGRSEAEARAAAAGTLGCPPEQLQLQQDPD
VLDTWFSSALFPFAALGWPEQSPDLRRFYPTSLLVTGSDLLFFWVARMAMLGQQLTGHLP
FSQVLLHSLVRDSQGRKMSKSLGNVIDPRDVIRGATLQELQEKLRSRVLDPQELRAAEEG
QRRQFPQGIPECGADALRLALSTHNAHGPEIRLGVASVLTQRRFCNKVWNGVGFVLRALG
GDRGTPKTPPEQVLPGSPLDRWVLARLAAAVAECGRRLEALEPQGAAAAVQSFWQRSFCD
VYLEVSKASLQSPALRPGAQETLLACAELGLRLLAPFAPFVAEELWQRLPRAPPAPPTLC
RAPFPDPRQLAHWRSPELEARVAAMLELVRAVRGLRETFRLGGAARPPVLVQCPEPARDW
LEPLGPAFRTLSGAGPVRLLPPGAGPGPGWAGAPAGPGTFVHLQLQGLVEPGAARAQLRA
RLGSLERRLRSLGGASPNPPGGAEQHQAAALRAELARLEQALQALETPGDPPRDPPGDPL
SPPRDPQLQGGPGV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcagggctggagcgtcctgtgggtgccgggcactgatcacgctggcatcgccacccag
gccatcgtggagcgctggctgtggcagcaccgggggctgcgccggcaggacctgagccgg
gccgagttcctgcgggaggtttggcactggaaggagcggcacggggacgagatcctggag
cagctgcgggcgctcggggcctcgctggactggagccgctgcgccttcaccatggacccg
ggcttctcgcgggcggtcaccgaggccttcgtgcgcctgttccaggcggggctgatccgg
cgggaccagcgcgtcgtcagctggagctgcgccctgcgctcggcgctggccgacgtcgag
gtggagccccgcgtcctgacgggccccacggcgctgagcgtccccagctgtccccacccc
gtcaccttcggcctcctcgtcaccttcgcctaccccgtggagggcgacgaggagctggag
ctgccggtggccaccacgcggcccgagaccatttttggggacgtggccgtggccgtgcac
ccgcgggacccccggtacctgcacctgcacggccgccgggtgcggcacccgttcagcggg
gccctgctgcccgtggtgaccgaccccagcgtccagcccgacctcggcaccggggcggtg
aaggtcacccccggtcacagcccccaggacctggcgctggcccgggcccacgggctgccc
ctgctctcggtcatcggggacgatggcaccttgtgtcccccgggcggggggtggctgcag
ggtgtgccccggttcgaggcccgtgcccgggtggtggccgcgctgtcccagcggggactc
gtccggggtgtccaggaccacgccatgaccctgcccctctgcagccgctccggggacgtc
gtcgagttcctgctcaagcgccagtggttcctgagctgcggggacatggccagggcggcc
ctggaggcggtgacgtcggggaggctccgcctcgtgcccaaattccacgagaagaactgg
aaaacctggatggaaaacgcgggggactggtgcctgtcccgccagctctggtggggtcac
cgcgtccccgcctaccaggtgagggggggtcctgtccccgggggtccccaggagggtccc
gggggtcccccccaggaggggccgtggtttgtggggcgcagcgaggccgaggcgcgggcg
gcggccgcgggcaccctgggctgcccccccgagcagctgcagctgcagcaagaccccgat
gttttggacacctggttctcctccgccctcttccccttcgccgccctgggctggcccgag
cagagccccgacctgcgccgcttctaccccacctcgctgctggtgacgggcagcgacctc
ctgttcttctgggtggcccgcatggccatgctgggccagcagctcaccggacacctgccc
ttctcccaggtgctgctgcactcgctggtccgggattcccagggacggaaaatgagcaaa
tccctgggaaacgtcatcgacccccgcgacgtcatcaggggggccacgctccaggagctg
caggagaagctccggagtcgcgtcctggacccccaggagctgcgggcggccgaggagggg
cagaggcggcagttcccgcaggggatccccgagtgcggcgccgacgccctgaggctcgcc
ctgagcacccacaacgcccacggccccgaaatccggctgggcgtggcctcggtgctgact
cagcgccgcttctgcaacaaagtctggaacggggtcggcttcgtgctgcgggccctgggc
ggggacagggggaccccgaaaacgccccctgagcaggtgctcccggggtcgcccctggac
cggtgggtgctggcccgcctggccgcggccgtggccgagtgtggccggaggctggaggcg
ctggagccgcagggcgccgcggccgccgtgcagagcttctggcagcgcagcttctgcgac
gtctacctggaggtgtccaaggcgtccctgcagtccccggcgctccgtcccggcgcccag
gagacgctgctggcctgcgccgagctggggctgcgcctgctggcccccttcgcccccttc
gtggccgaggagctctggcagcgcctgccccgcgccccccccgcgccccccacgctctgc
agggcccccttccccgacccccggcaactggcgcactggcgcagccccgagctggaggcg
cgggtggcggccatgctggagctggtgcgggccgtgcgggggctgcgcgagaccttccgg
ctcgggggggccgcccgccccccagtgctggtgcagtgcccggagccggctcgggattgg
ctggagccgctcggccccgccttccgcacgctctcgggggcggggcctgtgcggctcctc
cccccgggggcggggccggggccgggctgggcgggggctcccgcggggcccggaaccttc
gtgcacctgcagctccagggcctggtggagccgggagccgcccgggcccagctccgcgcc
cgcctcgggagcctcgagcggcgcctcaggagcctcgggggggcctcccccaaccccccc
gggggcgccgagcagcaccaggccgccgcgctccgagcagaactcgcccgcctggagcag
gccctgcaggccctggagacccctggggaccccccccgggacccccccggggaccccctg
agcccccccagggacccccagctccaggggggccccggggtttaa
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