Aphelocoma coerulescens (scrub jay): 138100737
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Entry
138100737 CDS
T10543
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03022
Basal transcription factors
acoe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138100737 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
138100737 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoe03021
]
138100737 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
acoe03400
]
138100737 (GTF2H4)
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
138100737 (GTF2H4)
DNA repair and recombination proteins [BR:
acoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
138100737 (GTF2H4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
138100737
NCBI-ProteinID:
XP_068854702
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MEPAPAPPPPRALSRGQLQCKNLQEFLRGLSPPTLDRLYGHPATCLAVFRELPGLAQAGI
MRMLFLEQPLPQAAVGLWVKKEHSREQEQSREVLLELRLWHPHTLPGGLPGVALHPNFRQ
NLRVALLGGGKAWSDDTAPLGPDRHARDVPALDKYAEERWEVVLHFMVGSPSAAVSQDLA
QLLVQAGLMKSEGGEPPCITSAGFQFLLLDTPAQLWFFILQYLRGAEARGMDLVEILSFL
FQLSFSTLGKDYSVEGMSESLLTFLQHLREFGLVFQRKRKSRRFYPTRLAIALASGTAGP
AGTAGPEPDGHGFVLVETNYRIYAYTDSELQVALIALFSELLYRFPNLVVAQVTRDSVQA
AIANGITADQIIHFLRTRAHPVMAKQTPVLPPTITDQIRLWELERDRLRFSDGVLYNQFL
SQVDFEVLRDHARSLGVLVFENPGRRLMVVTPGGHPDVKRFWKRQKHNG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggagccggccccggcgccgcccccgccgcgggcgctgtcccgggggcagctgcagtgc
aagaacctgcaggagttcctgcgggggctcagcccccccacgctggaccggctctacggg
cacccggccacctgcctggccgtgttcagggagctgccggggctggcgcaggccgggatc
atgcggatgctgttcctggagcagcccctgccccaggcggccgtggggctctgggtcaag
aaggagcacagcagggagcaggagcagagccgggaggtgctgctggagctgcgcctgtgg
cacccccacaccctcccgggggggctcccgggggtcgccctccaccccaatttccgacag
aacctcagggtggccctgctgggggggggcaaggcctggtcggacgacacggccccgctg
ggcccggacagacacgcccgggacgtgcccgcgctggacaaatacgcggaggagcggtgg
gaggtggttctgcacttcatggtggggtccccgagcgcggccgtgagccaggacctggcg
cagctgctggtgcaggccgggctcatgaagagcgaggggggggagcccccctgcatcacc
tcggccgggttccagttcctgctgctcgacacccccgcccagctctggttcttcatcctg
cagtacctgcggggggccgaggcccgcgggatggacctggtggagattttgtccttcctg
ttccagctgagcttctccaccctgggcaaggattactccgtggaggggatgagcgagtcc
ctgctgacgttcctgcagcacctgcgcgagttcgggctggtcttccagaggaagcggaag
tcgcggcggttctacccgacccggctggccatcgcgctggcctcgggcacggcggggcca
gcggggacagcggggccagagcccgacggccacggcttcgtcctggtggagaccaactac
cggatctacgcctacacagactcggagctgcaggtggccctgatcgcgctcttctcggag
ctgctctaccgcttccccaacctggtggtggcccaggtgacgagggacagcgtgcaggcg
gccatcgccaacggcatcaccgccgaccagatcattcacttcctgcgcacccgcgcccac
cccgtgatggccaaacagaccccggtgctgcccccgaccatcacggaccagatccggctc
tgggagctcgagcgggaccggctgcgcttctccgacggggtcctgtacaaccagttcctg
tcccaggtggatttcgaggtgctgcgggaccacgcccggagtttgggggtgctggtgttc
gagaaccccgggcggcgcctcatggtcgtcacccccgggggccaccccgacgtcaaacgc
ttctggaagcgccagaagcacaacgggtga
DBGET
integrated database retrieval system
