Aphelocoma coerulescens (scrub jay): 138100751 Help Entry 138100751         CDS       T10543                                  Symbol DDX39B Name (RefSeq) spliceosome RNA helicase DDX39B   KO K12812   ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] Organism acoe  Aphelocoma coerulescens (scrub jay) Pathway acoe03013   Nucleocytoplasmic transport acoe03015   mRNA surveillance pathway acoe03040   Spliceosome Brite KEGG Orthology (KO) [BR:acoe00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     138100751 (DDX39B)   09122 Translation    03013 Nucleocytoplasmic transport     138100751 (DDX39B)    03015 mRNA surveillance pathway     138100751 (DDX39B)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:acoe03019]     138100751 (DDX39B)    03041 Spliceosome [BR:acoe03041]     138100751 (DDX39B) Enzymes [BR:acoe01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      138100751 (DDX39B) Messenger RNA biogenesis [BR:acoe03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      138100751 (DDX39B) Spliceosome [BR:acoe03041]  Complex C   Other components    EJC/TREX     138100751 (DDX39B)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     138100751 (DDX39B) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD Helicase_C ResIII CMS1 Cas3-like_C_2 Motif Other DBs NCBI-GeneID:  138100751 NCBI-ProteinID:  XP_068854726 LinkDB All DBs Position Unknown AA seq 428 aa AA seqDB search MAENDVDNELLDYEDDEVENAAGADGAEAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAI VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC HTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI SSYIEQTR NT seq 1287 nt NT seq  +upstreamnt  +downstreamnt atggcggagaacgacgtggacaacgagctgctggactacgaggatgacgaggtggagaac gcggcgggggccgacggggccgaggccccccccaagaaggacgtgaagggctcctacgtg tccatccacagctccggcttccgcgacttcctgctcaagccggagctgctccgcgccatc gtcgactgcggcttcgagcacccctccgaagtccagcatgagtgcatccctcaggccatc ctgggcatggacgtgctgtgccaggccaagtccggcatgggcaagacggccgtgttcgtg ctggccacgctgcagcagctggagcccgtcacggggcaggtgtcggtgctggtgatgtgt cacacgcgggagctcgccttccagatcagcaaggagtacgagcgcttctccaagtacatg cccagcgtcaaggtggcggtgtttttcggggggctgtccatcaagaaggacgaggaggtg ctgaagaagaactgtccccacatcgtggtggggaccccgggccggatcctggcgctggcc cgcaacaagagcctcaacctcaaacacatcaagcatttcatcctggacgagtgcgacaag atgcttgagcagctcgacatgcgccgggacgtccaggagattttccgcatgaccccgcac gaaaagcaggtcatgatgttcagcgccaccctgagcaaggaaatccgccccgtgtgccgc aaattcatgcaagaccccatggagatcttcgtggacgacgagacgaagctgacgctgcac gggctgcagcagtactacgtcaaactcaaggacaacgagaagaacaggaagctcttcgac ctgctcgacgtgctcgagttcaaccaggtggtgatcttcgtgaagtcggtgcagcgctgc atcgccctggcgcagctgctggtggagcagaacttcccggccatcgccatccaccgcggg atgccgcaggaggagaggctgtcccggtaccagcagttcaaggacttccagcgccgcatc ctggtggccacgaacctctttggccgcgggatggacatcgagagggtcaacatcgccttc aactacgacatgcccgaggactcggacacctacctgcaccgggtggcccgggcggggcgt ttcggcaccaagggcttggccatcaccttcgtgtcggacgagaacgacgccaaaatcctc aacgacgtccaggaccggttcgaggtgaacatcagcgagctgcccgacgagatcgacatc tcctcctacatcgaacagacccgataa

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