Aphelocoma coerulescens (scrub jay): 138101129
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Entry
138101129 CDS
T10543
Symbol
SRRT
Name
(RefSeq) serrate RNA effector molecule homolog isoform X1
KO
K27103
serrate RNA effector molecule
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138101129 (SRRT)
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
138101129 (SRRT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
138101129
NCBI-ProteinID:
XP_068855079
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All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRDDWSDRDWERGRERRSRDYRDYDRTR
RERFSPPRHELSPPQKRLRRDWDDHGSDPYHSGYELPYSGGGAGPTYGPPQTPWGPHEMQ
HQLLQHQLLPIQARLGTIAEVDLGLAPPVMKSFKEFLLSLDDAVDETEAVKRYNDYKLDF
RRQQLQEFFLAHKDEECFFRGPADGDARGECRFRSKYHPDEAGKRQQEAQAALRNRLGVF
LYLWEHGWFDNLLLDIDRAPQIIKTLDAAVIKMEGGTEHDLRILEQEEEEERTEKAEGPK
KEEPRPPEPPGKGPTERPDGDDSAKAEGAEPGAEPATGAGPEEEDEGPDKGPKAEEGDKE
GGGKARPRQRSRDSEDGDSDSGDSEGGARRPQSKDEEPKDDKSHPEDDAGTPPPTTTLSP
PQKPKEGVPGAAPGGVPDPKPRPLHKTCSLFMRNIAPNIAQAEIVALCKRYPGFMRVALS
EPQPERRFFRRGWVTFDRSVNIKEICWSLQNIRLRECELSPGVNRDLTRRVRNVSGLTQH
RPIVRHDIKLAARLVQALDARARLWSPPGTGTAGQDPPGDSGDAHGDTEPPPATEPGAQN
PVLRHITDYLIEEVSAEEEELLGQGQGQGQGQGQGPGATPAEDAARESHPAEVTVERDEK
LLKVLDRLLLYLRIVHSVDYYNTSEYPNEDEMPNRCGIIHVRGPLPPNRVSHGEVSEWQR
GFEARLAPLLAGPGAVPEEEALRLGRKDPEQELEKFVSANTQELGKDKWLCPLSGKKFKG
PEFVRKHIFNKHGDKMGAVRKEVLFFNNFLMDPKRPALPEGGKGGPNAGPNAGLAPGALP
YPPQSPQGLMPYGTPRPPMLGYGGSHPYPPGPYGGRGSYETFRGQGGAGGGYLNKPRSRM
VRGDPRAIVEYRDLDAPEDVDFF
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgggggacagcgatgacgagtacgaccggcggcgcagggacaaattccggcgggaacgg
agcgactacgaccggtccagggagagggacgagaggaggagggacgactggagtgaccgg
gactgggagcggggccgggagcgccgcagccgggattaccgggactacgaccggacacgg
cgggaaaggttctcccccccccggcacgagctgagcccccctcagaaacggctgcgcagg
gactgggatgaccacggcagtgacccctaccacagcggctacgagctgccctacagcggg
ggcggggccggccccacctacggccccccccagacgccctggggcccccacgagatgcag
caccagctcctgcagcaccagctgctgcccatccaggccaggctgggcacgatcgccgag
gtggacctgggcctggcgccgccggtgatgaagagcttcaaggagttcctgctgtcgctg
gacgacgccgtggacgagacggaggcggtcaagcgctacaacgactacaagctggacttc
cgccggcagcagctgcaggaattcttcctggcgcacaaggacgaggagtgtttttttcgg
ggcccggcggacggcgacgctcgcggcgagtgtaggttccgctccaagtaccacccggat
gaggccgggaagcggcagcaggaggcccaggccgccctcaggaaccgcctcggggtcttc
ctgtacctgtgggagcacggctggttcgacaacctgctcctggacatcgaccgtgccccc
cagatcatcaaaaccctcgatgcagcggtgattaagatggaggggggaacagagcacgac
ctgcggatcctggagcaggaggaggaggaggagcggacagaaaaggccgaaggccccaaa
aaggaggagccacggccgccagagccccccgggaagggccccactgagcgccctgacggc
gacgacagcgccaaggctgaaggggcggagccaggggcggagcctgcgacaggggcaggg
ccggaggaggaggatgaggggccggacaaggggcccaaggccgaggaaggtgacaaggag
ggcgggggcaaggcgcggccacgtcagcgcagccgggacagcgaggacggggacagtgac
agtggggacagcgaggggggggcgcggagaccccaaagcaaggacgaggagcccaaggat
gacaaaagccaccctgaggacgacgccgggacccctccccctacgaccaccctgtcccca
ccccaaaaacccaaggagggggtcccgggggcagccccggggggggtcccggaccccaaa
ccccggcccctgcacaaaacctgctctctgttcatgcggaacatcgcccccaacatcgcc
caggctgagatcgtggcgctgtgcaagcgctaccccgggttcatgcgcgtggcgctgtcg
gagccacagcccgagaggaggttcttcaggaggggctgggtgacctttgaccgcagcgtg
aacatcaaggagatctgctggagcctgcagaacatccggctcagggagtgcgagctcagc
cccggcgtgaaccgggacctgacgcgccgcgtccggaacgtgtccggcctgacccagcac
cgccccattgtccggcacgacatcaagctggccgcccgcctggtccaggcgctggacgcc
cgcgcccggctctggtcacccccaggcacggggacggcgggacaggacccgcccggggac
agcggggacgcccacggggacaccgagccaccccctgccaccgagcccggggcgcagaac
ccggtgctgcggcacatcaccgattacctgatcgaggaggtgagcgcggaggaggaggag
ctgctgggccagggccagggccagggacagggccagggccagggcccaggggccaccccc
gccgaggacgcggcgcgcgagagccacccggccgaggtcaccgtggagcgcgacgagaag
ctgctcaaggtgctggaccggctgctgctgtacctgcgcatcgtgcactccgtggattac
tacaacacctccgagtaccccaacgaggacgagatgcccaacaggtgcgggatcatccac
gtgcggggcccgctgccccccaaccgcgtgtcccacggcgaagtgtccgagtggcagcgg
ggcttcgaggcccggctggccccgctgctggccggccccggcgctgtccccgaggaggag
gcgctcaggctcggccgcaaggaccccgagcaggagctggagaagttcgtcagcgccaac
acgcaggagctgggcaaggacaagtggctgtgtcccctcagcggcaagaagttcaagggc
cccgagttcgtccgcaagcacatcttcaacaagcacggggacaagatgggcgccgtccgc
aaggaggttctgttcttcaacaatttcctgatggaccccaagcggccggcgctgcccgag
gggggcaagggcggccccaacgccggccccaacgccggcctggccccgggggcgctcccg
taccccccccagtccccgcaggggttgatgccctacgggaccccccggccccccatgctg
ggctacggaggctcccacccgtacccccccgggccctacgggggtcgcggcagctacgaa
accttccggggccaggggggggccgggggggggtacctgaacaaaccccgcagcaggatg
gtgcggggcgacccccgggccatcgtcgagtaccgggacctggacgctcccgaggacgtg
gatttcttctga
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