Aphelocoma coerulescens (scrub jay): 138101188 Help Entry 138101188         CDS       T10543                                  Symbol THOC6 Name (RefSeq) THO complex subunit 6 isoform X1   KO K13175   THO complex subunit 6 Organism acoe  Aphelocoma coerulescens (scrub jay) Pathway acoe03013   Nucleocytoplasmic transport acoe03040   Spliceosome Brite KEGG Orthology (KO) [BR:acoe00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     138101188 (THOC6)   09122 Translation    03013 Nucleocytoplasmic transport     138101188 (THOC6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:acoe03019]     138101188 (THOC6)    03041 Spliceosome [BR:acoe03041]     138101188 (THOC6) Messenger RNA biogenesis [BR:acoe03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      138101188 (THOC6) Spliceosome [BR:acoe03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     138101188 (THOC6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_WDHD1_1st WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_NOL10_N Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_WDR75_1st DSE1_N WDR55 Beta-prop_SCAP Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 EIF3I ASA1 WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_EML WDR90_beta-prop_4th WDR54 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd TRM82_WD Beta-prop_EIPR1 Beta-prop_BBS7 Beta-prop_DCAF4 Beta-prop_HPS5 Motif Other DBs NCBI-GeneID:  138101188 NCBI-ProteinID:  XP_068855153 LinkDB All DBs Position Unknown AA seq 335 aa AA seqDB search MSSPGPVPGGVRRARQLLHVSVLAQSAAPCGRFLAAANDFGEIAIFGLSAALSAEAKEEN RRPVNVFRAHSGPVYSLASTERLLLSGSDGEIRGWSWAELGRKGCRELWTRRPPCRSSLE VPEINALEVNQRDHWVALAGGDGAVRVLDLESGTFTHELRGHQDLVHIVALREQLPQVLS GGEDGTVRLWDLRTGSQVQLIEVHKYQECSRPQLGKWIRCLATESDWMVCGGGPALTLWH LRSVTPTTVFALPPPQHHALFHQDLVLSGGVGPALHLLQLSGDVRGRVPVSPPALRSLCL HPRSPEHQVLTVAGNSPKIDVFTNLGYRAFSLSFT NT seq 1008 nt NT seq  +upstreamnt  +downstreamnt atgtcgtcgccgggcccggtgccgggcggggtgcggcgggcgcggcagctcctgcacgtg tcggtgctggcgcagagcgcggccccgtgcgggcgcttcctggcggccgccaacgacttc ggcgagatcgcgatcttcgggctctcggccgcgctcagcgctgaggccaaggaggaaaac cggagacccgtgaatgtgttcagggcgcactcaggccccgtgtactccctggcctcgacc gagcggctcctcctgagcggcagcgatggcgaaattcggggctggagctgggccgagctg ggccgcaagggctgtcgggagctctggacccgccgtcccccctgcaggagcagcctggag gtgccagagatcaacgcgctggaggtgaaccagagggatcactgggtggccctggcgggg ggggacggggccgtgcgggtgctggacctggagagcggcaccttcacccacgagctgcgg gggcaccaggacctcgttcacatcgtggcccttcgggagcagctcccgcaggtgctgtcg gggggggaggacggcaccgtgcggctctgggatctccggacgggctcccaggtgcagctg atcgaggtgcacaaataccaggagtgcagccgcccccagctgggcaagtggatccggtgt ttggccactgagagcgactggatggtgtgcgggggcggccccgccctcaccctgtggcac ctgcgctcggtgaccccgaccacggtgttcgccctgcccccgccccagcaccacgccctg ttccaccaggacctggttctctcggggggggtgggccccgccctgcacctgctgcagctc agcggggacgtgcgggggagggtcccggtgtcgcccccggccctgcgcagcctctgcctc cacccccgctcacctgagcaccaggtgctgacggtggccgggaacagccccaaaatcgac gttttcaccaacctgggctaccgggccttctcactgagcttcacctga

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