KEGG   Aphelocoma coerulescens (scrub jay): 138101221
Entry
138101221         CDS       T10543                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    138101221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:acoe04131]
    138101221
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:acoe04147]
    138101221
Membrane trafficking [BR:acoe04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    138101221
Exosome [BR:acoe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   138101221
  Exosomal proteins of other body fluids (saliva and urine)
   138101221
  Exosomal proteins of colorectal cancer cells
   138101221
  Exosomal proteins of bladder cancer cells
   138101221
SSDB
Motif
Pfam: VPS28 DAHL
Other DBs
NCBI-GeneID: 138101221
NCBI-ProteinID: XP_068855179
LinkDB
Position
Unknown
AA seq 221 aa
MFHGIAGPAGMGAPGNKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKDC
VSPNEYTAACSRLLVQFKAALKQVQGAEIASIDDFCRKFRLDCPLAMERIREDRPITIKD
DKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMTRMSSLPPDFEGRQKV
NQWLQTLSAMSASDELDDSQVRQMLFDLESAYNAFNRFLHA
NT seq 666 nt   +upstreamnt  +downstreamnt
atgttccacggcatcgcgggcccggccgggatgggcgcgcccgggaacaaaccggagctc
tacgaggaggtgaagctctacaagaacgcccgcgagcgtgagaagtacgacaacatggcc
gagctcttcgccgtggtgaagacgctgcaggcgctggagaaggcttacatcaaggactgc
gtgtcccccaacgagtacacggcggcgtgctcgaggctgctggtgcagttcaaggcggcg
ctgaagcaggtgcagggcgccgagatcgcctccatcgacgacttctgccgcaaattccgg
ctggactgtcccctggccatggagcgcatccgggaggatcggcccatcaccatcaaggac
gacaaagggaacctgaaccgctgcatcgccgacatcgtctcccttttcatcacggtgatg
gacaaactgcggctggagatccgagccatggacgagatccagccggacctgcgggagctg
atggagaccatgacccgcatgagctccctgccccccgacttcgagggccgccagaaggtg
aaccaatggctccagaccctcagcgcgatgtcggcctcggatgagttggacgattcccag
gtgcggcagatgctcttcgacctcgagtccgcctacaacgccttcaaccgcttcctgcac
gcctga

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