Aphelocoma coerulescens (scrub jay): 138101437
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Entry
138101437 CDS
T10543
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138101437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoe03041
]
138101437
03032 DNA replication proteins [BR:
acoe03032
]
138101437
Spliceosome [BR:
acoe03041
]
Complex A
U1 snRNP components
Sm proteins
138101437
U2 snRNP components
138101437
Complex B
U1 snRNP components
138101437
U4/U6.U5 tri-snRNP components
138101437
Complex C
U2 snRNP components
138101437
DNA replication proteins [BR:
acoe03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
138101437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Ldh_1_C
Motif
Other DBs
NCBI-GeneID:
138101437
NCBI-ProteinID:
XP_068855322
LinkDB
All DBs
Position
Unknown
AA seq
118 aa
AA seq
DB search
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLIAGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgaacaagcccaagagcgagatgacgcccgaggagctgcagaagcgcgag
gaggaggagttcaacacgggcccgctgtcggtgctgacgcagagcgtcaagaacaacacc
caggtgctcatcaactgccgcaacaacaagaagctgctgggccgcgtcaaggccttcgac
aggcactgtaacatggtgctggagaacgtgaaggagatgtggaccgaggtgcccaagagc
ggcaaaggcaagaagaagtccaagcccgtcaacaaggaccgctacatctccaagatgttc
ctgcgcggcgactccgtcatcgtcgtcctgcgcaaccccctcatcgccggcaagtag
DBGET
integrated database retrieval system
