Aphelocoma coerulescens (scrub jay): 138101443
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Entry
138101443 CDS
T10543
Symbol
HIF3A
Name
(RefSeq) LOW QUALITY PROTEIN: hypoxia-inducible factor 3-alpha
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
138101443 (HIF3A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138101443
NCBI-ProteinID:
XP_068855327
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Position
Unknown
AA seq
575 aa
AA seq
DB search
MDGRPGPRPTPEGRRERSRDAARCRRSREAEVFGQLALALPFARGVSAHLDKASIMRLTI
SYLRVHRLLAAGAWAAAAEAVDGCYLQALSGFVMVLSEGGDMLYLSENVSRLLGLSQLEL
IGHSVFDFVHPCDHEELQDVLSPRQGGPRRRGERSGRSFSLRMKSTLTGRGRCLNLKAAS
WKVLHCAGHMRTYAGAGGGDPPLRCLVLICEAIPHPGAIEAPLGSGTVLTRHSMDMKFTY
CDDRIGEVAGYHPEELLGCSLYEFVHALDSNTLSRSVHTLLSKGQAVTSQYRFLAKRGGF
LWAQTQATVMGGGRAAPEGIVCLHFVLSRVEQRGLVLSLEQTQRRDLGRGRRPPPPTPSN
APPDAVLDLSLGVGVPGVLAFVRPSNVPEAALQRDPRRFCSPELVRLLAPIFDPPPAPPP
RRPRSPSPPPGDKLGVQVQKIFGGSRGPGSALQTSPLDLAMLAPYIPMDGDFQLGGAEPH
RGRGLRPTGPAPKAEATPPRPRARSFPGRGPAPSRPGHALPRWGSDPALGHAPRPRPARK
RPREPSEEDPGAPLKRPELDPQLLPPLGLRCWLMV
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcggcccggaccgaggccgacccccgaggggcgccgggagcgctcccgggat
gcggcgcggtgccggcggagccgcgaggccgaggtgttcgggcagctggccctggccctg
cccttcgcccgcggggtcagcgcccacctggacaaagcgtccatcatgcgcttgaccatc
agctacctgcgcgtgcaccgcctgctggccgcgggggcgtgggcggcggcggccgaggcg
gtggacgggtgttacctgcaggcgctgagcggcttcgtgatggtgctgagcgaggggggg
gacatgttatacctgtccgagaacgtcagccgcctgctggggctcagccagctggagctg
atcgggcacagcgtgttcgacttcgtgcacccctgcgaccacgaggagctgcaggacgtg
ctcagcccccgccaggggggtccccggcggcggggggagcgctcggggcgcagcttctcc
ctgcgcatgaagagcaccctgaccgggcgcgggcgctgcctcaacctcaaagcggcgtcc
tggaaggttctgcactgcgcggggcacatgcggacgtacgcgggggcggggggcggcgac
ccccccctgcgctgcctggtgctgatctgcgaggccatcccgcaccccggggccatcgag
gccccgctgggctcgggcaccgtcctcactcgccactccatggacatgaagttcacctac
tgcgacgataggattggggaggtggccgggtaccaccccgaggagcttttggggtgctcc
ctctacgagttcgtccacgcgctcgactccaacaccctgagccggagcgtccacaccctg
ctgagcaagggccaggcggtgacgagccagtaccggttcctggccaagcgcgggggcttc
ctgtgggcacagacccaggccaccgtcatgggcgggggtcgcgccgcccccgagggcatc
gtctgcctgcacttcgtgctcagccgcgtggagcagcgcgggctggtgctgtccctggag
cagacccagcgccgcgatttggggagggggcgtcgccccccgccccccaccccttccaac
gcccccccggacgccgtgctcgacctgagcctcggtgtgggggtcccgggggtcctggcc
ttcgtgcgcccctcgaatgtccccgaggccgctctgcagagggacccccggcgcttctgc
tcccccgaactcgtccggctcctcgcccccatcttcgacccccccccggcgccccccccg
cgccgcccccgcagcccctccccgccccccggggacaaactgggggtgcaggtgcagaag
atttttggggggagccgcggccccggcagcgccctgcagacgtccccgctggacctggcc
atgctggccccctacatccccatggacggcgacttccagctgggcggggccgagccgcac
agggggcgtggcctgcgccccacaggccccgcccccaaagccgaggccacgcccccaagg
ccccgcgcccgcagcttccctggccgaggccccgccccctcccggcctggccacgccctc
ccgcgctggggcagcgaccccgccctcggccacgcccctcggccacgccccgctcggaag
aggccgcgggagccgagcgaggaggaccccggggcccccctgaaacgccccgagctggac
ccccaattgctgccccccctcgggctgcgctgctggctgatggtctga
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