Aphelocoma coerulescens (scrub jay): 138101789
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Entry
138101789 CDS
T10543
Name
(RefSeq) nuclear receptor ROR-gamma-like
KO
K08534
RAR-related orphan receptor gamma
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138101789
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
acoe03310
]
138101789
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
138101789
Nuclear receptors [BR:
acoe03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
138101789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
138101789
NCBI-ProteinID:
XP_068855678
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MSTAHIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSERRGPSLACSRGQRCDIDRATR
TRCQHCRLQKCLRLGMSRDAVKFGRMSKKQRDRLQAEVLEQLGRKNGENGENREEPERRE
QPEPRGNREKREKWENREQRERERAAQGPPELPPAGRCPPVSPGVPAACPSGAWPAEEAT
KRGQDGDREATATSPHPGTGGVPESPAGLEIELLTQSVLLSHRATCHPRAEELQGRRWDS
FTREEICAYQSQPTAEMWQRCARRVTEAIESVVEFAKRLRGFLELSQHDQIVLLKAGAME
VVLVRMCRAFDAATRSVLFEGKLAGPELFRSLGCPELVASIFDLAQSLSALRCSESELAL
LSALVLVNAGRPCLQDRPRVARLQGHLDVAFRLLLRRTRREGLLARLPTPGRLRALCSQH
LEQVQAFRRLHPGGISAAFPPLYRELFAPDPADPPAGTR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgcccacatcgaggtgattccctgcaagatctgcggggacaaatcctccggg
atccactacggggtcatcacctgcgagggctgcaagggctttttccggcgcagcgagcgg
cgcgggccgagcctggcgtgcagccgcgggcagcgctgcgacatcgaccgcgccacccgc
acccgctgccagcactgccgcctgcagaagtgcctgcgcctcggcatgtcccgcgacgcc
gtcaagttcggccgcatgtccaagaagcagcgggaccggctccaggccgaggtgctggaa
cagctgggaaggaaaaatggggaaaatggggaaaatcgggaagagccggagcggcgggaa
cagccggaaccacggggaaaccgggaaaaacgggaaaaatgggaaaaccgcgagcagcgc
gaacgggaacgggcggctcaggggccaccggagctccccccggccgggcgctgtcccccg
gtgtcccccggtgtccccgcggcgtgtcccagcggggcgtggcccgcggaggaggcgaca
aagcggggacaggacggggacagggaggcgacggcgacgtcccctcatcccggtaccggc
ggcgtcccggagtcaccggcgggcctggagatcgagctcctgacccagagtgtcctcctg
tcccaccgtgccacgtgccacccccgcgccgaggagctgcagggccgccgctgggacagc
ttcacccgcgaggagatctgcgcctaccagagccagcccacggcggagatgtggcagcgc
tgtgcccgccgtgtcaccgaggccatcgagagcgtggtggagttcgccaagcgcctgcgc
ggcttcctggagctcagccagcacgaccagatcgtcctgctcaaggcgggtgccatggag
gttgtcctggtccggatgtgtcgcgccttcgacgccgccacccgctccgtcctcttcgag
ggcaaactcgcggggcccgaactcttccgctcgctggggtgccccgagctcgtcgcgtcc
atcttcgacttggcgcagagcctgagcgcgctgcgctgctccgagagcgagctggcgctg
ctcagcgccctggtgctcgtcaacgccggccggccgtgcctgcaggaccgcccacgggtg
gcccggctccagggacatttggacgtcgccttccggctcctgctgcgccggacccgccgc
gaggggctcctggccaggctgcccaccccgggccggctccgcgctctctgctcgcagcac
ctggagcaggtccaggctttccgccgcctccaccccggcgggatctcggccgccttcccc
ccgctctaccgggagctcttcgcccccgaccccgccgatccccccgcggggacccgctga
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