Aphelocoma coerulescens (scrub jay): 138102193
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Entry
138102193 CDS
T10543
Symbol
POC1B
Name
(RefSeq) POC1 centriolar protein homolog B isoform X1
KO
K16482
centriolar protein POC1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138102193 (POC1B)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
acoe03037
]
138102193 (POC1B)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
138102193 (POC1B)
Cilium and associated proteins [BR:
acoe03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
138102193 (POC1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
NBCH_WD40
CFAP251_N
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_EIPR1
DSE1_N
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_Vps41
WD40_RFWD3
ASA1
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_HPS5
PAC11
Beta-prop_DCAF4
Beta-prop_NOL10_N
Ge1_WD40
RMC1_N
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_VPS8
BCAS3_WD40
PROPPIN
Beta-prop_Nup120_160
Beta-prop_IP5PC_F
Beta-prop_NUP159_NUP214
Tricorn_N
Motif
Other DBs
NCBI-GeneID:
138102193
NCBI-ProteinID:
XP_068856046
LinkDB
All DBs
Position
1A:complement(44403434..44454137)
Genome browser
AA seq
468 aa
AA seq
DB search
MASPLEDPVLIRSFRGHTAAVTGVAFSADTAGLATCSVDRFLMLWKLKNQCRAYRFAGHA
EAVTSVEFSPDGQVLASASQDHTVRLWIPCIHGESSVLKGHTASVRSVSFSHDGYSIVSA
SNDKSIKIWSVCYQRLLFTLFKHTRWVRCAKFSPDGRIIVSCGEDNSVNIWDTRSKTCVN
SFSDYEGYANFVAFNRSGTCIASAGSNHTVKLWDIRTNKLLQHFRVHRAGVNCISFHPSD
NYLITASSDGTLKILDLLGERLIYTLHGHQGPVLCVAFSKGGEKFASGGADAQVLLWKTN
FDTLDYKEVLKHNFRRTHIDDPPHLLDIYPRSPHLHDGKLESVEVNPTFDVPDTLTPDPV
IIGIRPSSTISTPVSSKSEELQSPSAFPSTRRSKRKAENESGSAVRSGEKHRGVSSAVDS
ALDHIVGQLDLLTLTISLLEHRLTCTEDKLKECIKEQQKILLKENQNK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcctccccgctggaggaccccgtcctgatccggtccttccgcggccacacggcggcg
gtgacgggcgtcgccttcagcgcggacacggcggggctggctacctgctctgtggatagg
tttcttatgttgtggaagctgaagaatcagtgcagagcttacagatttgcaggccacgcg
gaagcggtgaccagtgtagagttctcaccagatgggcaagtgctggcttcagcttctcaa
gatcacacggtcaggctatggattccttgcattcacggagaatcatcagtactgaaaggt
catacagcatctgttcggagtgtgagcttttcccatgatggctactctatagtttcagca
tccaatgacaagtcaataaaaatatggagtgtttgctatcagcgccttttgtttaccctg
ttcaaacacactcgctgggttcgctgtgccaaattttcgcctgatggaagaataatagta
tcttgtggtgaggacaactccgttaacatctgggatacaagaagtaaaacttgtgttaat
agcttctcagattatgaaggatatgcaaattttgtggctttcaaccgaagtggaacatgt
atagcttctgcaggttccaatcacacagtgaaactatgggatattcgaacgaacaagcta
ctgcagcatttcagagttcacagagcaggggttaattgtatatcattccatccttctgat
aactacctcatcactgcttcttctgacggtacccttaagattctggacctcttaggagaa
agacttatttacactcttcatggacaccagggacctgtactttgtgtggctttttcaaaa
ggtggtgaaaaatttgcttcaggtggagcagatgctcaggtattactatggaaaaccaac
ttcgatactttggattataaagaagttctcaaacacaattttagaagaacacatattgat
gatcctcctcatctgcttgatatttacccaaggtcacctcatctccatgatggaaaactt
gagtcagttgaggtcaaccctacctttgatgtgcctgatacgctaacacctgacccagtt
atcatagggattagaccctcttcaacgatcagtactcctgttagtagcaaaagtgaagag
ctgcagagtccctctgcttttccctccacaagacgttcaaaaaggaaggcagagaacgag
agcgggtcagctgtgcgtagtggggagaagcacagaggcgtctcctccgccgtggacagt
gctttggaccacattgtggggcagctggatttgttaactctaactatttcactcctagaa
catcgtctgacttgtactgaagataaattgaaagaatgcataaaagagcagcaaaaaata
ttacttaaggaaaaccagaacaaataa
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