Aphelocoma coerulescens (scrub jay): 138102712
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Entry
138102712 CDS
T10543
Name
(RefSeq) zinc finger RNA-binding protein-like isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoe03041
]
138102712
Spliceosome [BR:
acoe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
138102712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
138102712
NCBI-ProteinID:
XP_068856564
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Position
W
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AA seq
1069 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYT
VHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQ
EAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAAAQPQPSVAESY
YQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVP
SYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQKQAAAAAAAAATAAWTGTT
FTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQN
TNNNSTSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPNV
VTQAPTSTSTSASKPTASASNIATSSSTVNSSVASSAVKILTPMANAPLNTVSNNKTSST
AANIAVKKISPPKINFVGKYRSGNKLQTTGSKLEEMKSAESVKATTAATVQTQEVKPDTA
AEPVTPTTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRR
HRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEED
MYWRRMEEEQHHWDDRRRIPDGGYPHGPPGPLGLLGVRPGMPPQPQGPAPLRRPDSSDDR
YVMTKHAAIYPTEEELQAVQKIVSITERALKLVSDNMTDHEKNKSKEGDDKKDSSKDRAL
KGVLRVGVLAKGLLLRGDRNVNLVLLCAEKPSKMLLGFIAESLPKQLAVISPEKYDIKCA
IPEAAIILNSCVEPKMQVTITLTSPVIREENMRDGDVTSGMVKDPPDVLDRQKCLDALAA
LRHAKWFQARANGLQSCVVIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQSPG
DALRRVFECISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSSAQFALRLLAFRQ
IHKVLGMDPLPQMNQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgcccggtagtttctttcacctatgtgccaagccgcctgggagaagat
gccaaaatggccaccggcaactactttggattcacccatagcggggctgctgcccagtat
agccagcagccagcttcgggcgtagcttattcccatccaactacagttgccagctacact
gtccaccaggcgccagttgctgcgcacactgtcactgcagcctatgctccagcagcagct
acagttgcagtagccaggcctgctccagtagctgttgcagctgctgcaacagctgctgct
tatggaggctatcctacagcgcacacagctacagattatggttatacacagaggcaacaa
gaagctccaccaccaccacctcctgtcactacgcagaattaccaggattcctattcttat
gttcgatctactgccccagctgtagcttatgacagcaaacaatactatcaacaaccaaca
gcaactgctgcagctgtggctgctgctgcccagcctcaaccttcagtggctgagtcatac
taccagacagctccaaaagcaggatatagccaaggggcaactcagtatacccaagcccag
caaacgcgacaagtgacagctataaaacctgcaaccccaagtccagcaacaactacattt
tctatatatccagtatcctctactgtgcagccggtagcagctgcagctactgttgttcca
tcctatactcaaagtgcaacatacagtacaacagcggttacttactctggtacctcttat
tctggctatgaagccgcagtatattcagctgcatcatcctattaccagcagcagcagcag
cagaaacaggcagcggcagcagcagctgctgctgcaacagctgcttggacagggaccacc
tttactaaaaaggcaccattccaaaataagcaactgaaaccaaagcaacctcccaaacca
ccccagatccactactgtgatgtttgcaagatcagttgtgctggaccacagacttataaa
gaacacttagaaggccagaaacacaaaaagaaagaagcggcgttaaaagcttcccagaac
accaataacaacagtacttctgctcgtggaactcagaatcagttgcgttgtgagctttgt
gatgtgtcttgtacaggagcagatgcttacgctgcccatatccgtggagccaaacatcaa
aaagtagtaaagttgcacacaaaacttggcaaacctattccttcaactgaaccaaatgtg
gttacccaagctcctacttcaacatccacatctgcttctaaaccaactgcctctgcttca
aatatagcaactagcagcagtactgtgaactcctctgttgcatcctctgcagtgaaaatt
cttactcccatggcaaatgcaccacttaacactgtgtccaacaacaaaacatcttcaact
gctgctaatatagctgtaaagaaaatatctccaccaaaaataaactttgttggcaagtac
agaagtggtaataaacttcagacaacaggaagtaaactggaagaaatgaaatcagctgaa
agtgttaaagcaacaactgctgctacagtacaaacacaggaagtaaaaccagacacagca
gctgaaccagtgacacctacaactcttgctgccttgcaaagtgatgtccagccagtgggc
catgactatgtggaggaggtaagaaatgatgaaggaaaggtgatccgctttcactgtaaa
ctttgtgaatgcagttttaatgatcctaatgccaaagagatgcacttaaaagggaggcgg
cacagacttcagtataagaaaaaagtaaacccagatttacaagtagaagtaaaacccagt
attcgagcaagaaaaattcaagaagagaagatgaggaaacagatgcagaaagaagaatac
tggagaaggcgagaagaggaagaacgctggaggatggaaatgaggcgatatgaagaggac
atgtactggaggagaatggaggaagagcagcatcactgggatgaccgtcgcagaatacca
gatgggggatatcctcatggtcctccgggacctctaggcctgctgggagttagaccagga
atgcctcctcagccccaaggaccagctcctctacgacgccctgactcctctgatgaccgc
tatgtgatgaccaaacatgcagctatatatccaacagaggaggaacttcaagcagtccaa
aaaattgtttctattactgagcgtgctttgaaacttgtttctgacaatatgactgaccat
gaaaaaaacaagagcaaagagggagatgacaaaaaagacagcagtaaagacagagctttg
aaaggagttttacgggtgggcgttttggctaaaggtttgttactccgtggagaccgaaat
gtcaatcttgttttgttatgtgctgagaagccttcaaagatgttacttggttttattgct
gaaagtcttcccaaacaacttgcagtaataagtcctgagaaatatgatatcaaatgtgca
atcccagaagcagcaataattttaaattcatgtgtggaacccaaaatgcaagttactatc
acactgacatctccagtcattcgggaggagaacatgagggatggagatgtaacctcgggt
atggtgaaagacccaccggacgtcttggacaggcaaaaatgccttgacgctctggctgct
ctacgccacgctaagtggttccaggctagagctaatggtctgcagtcctgtgtggttatc
atacgtattcttcgtgacctctgtcagcgggttccaacttggtctgattttccaagctgg
gctatggagttgcttgtggaaaaagcaattagcagtgctactggaccacagagtcctggg
gatgcactaagaagagtttttgagtgtatatcttcaggaatcatccttaaaggtggtcct
ggccttctggacccttgtgaaaaagatccttttgatacacttgctgtaatgacagatcag
caacgagaggatattacttcaagtgcacagtttgcgctgagactccttgcattccgtcaa
atacacaaagttttaggaatggatccattaccacagatgaatcaacgcttcaacatccat
aataatcgtaaaagaagaagggacagtgatggggttgatggatttgaagcagagggaaaa
aaagacaaaaaagattatgataacttttaa
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