Aphelocoma coerulescens (scrub jay): 138102746
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Entry
138102746 CDS
T10543
Name
(RefSeq) transcription factor RFX3-like isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138102746
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Other basic domains
RF-X
138102746
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
RFX1_trans_act
ThermoDBP-RP_arch
Pox_D5
Motif
Other DBs
NCBI-GeneID:
138102746
NCBI-ProteinID:
XP_068856597
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Position
W
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AA seq
747 aa
AA seq
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MQTSETGSDTGSTVTLQASVAGQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYV
EGSDTVYTNGTIRTTYPYTETQMYSQNTGGNYFEGSSAQATTVVSSHSMVGTGGIQMGVA
GGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLLNSH
LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGT
RGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPVQKVDGVPDGFTGSGQ
QTGTSAEQTIIAQSQHHQQFLDASRVLPEFGEVEISSLPDGTTLEDIKSLQSLYREHCEA
IVDVIVNLQFSLIEKLWQTFWRYSPSAPADDAAIIELSNLSEIESRLPKGKLITLCKNES
ILKWMGNCDHVMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSSAMNNIPQRMIQ
SKVATVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ
CDDNVVQRLETDFKMTLQQQSTLEQWAAWLDNVMVQALKPYEGRPSFPKAARQFLLKWSF
YSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEFGDLNAI
SPGHTDKDEGSEVESEIEEEMDENGEPQAKREKTDLNQAFQVGCLQQPVLESGIEQSLLN
PIHNEHTVTNTQTIRQCSATGNTYTAV
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgcagacatcagagactgggtcggacacaggttcgactgtgactttacaggcatctgtg
gctggccaggcagcagtacccacacaggtagtacagcaggtaccggttcagcaacaggta
cagcaagtacagactgtgcaacaggtacaacatgtctacccagcccaggttcagtatgtg
gagggaagtgacacagtctacacaaatggaactattcgaacaacttatccttacacggaa
acccagatgtatagccaaaacactgggggaaattacttcgaaggaagttctgcacaggca
actacagtggtctcctctcatagtatggtgggcaccggagggattcagatgggtgttgca
ggaggacagctcattagcagctcaggagggacctatctgattggcaattcaatggaaaat
tctggtcattcagtgactcatacaacacgggcctccccagctacaattgaaatggcgatt
gagacacttcaaaagtctgatggtctttctactcacagaagctctcttctcaacagccat
ctccaatggcttttagacaactatgaaactgcagaaggagtgagtctccccagaagtacc
ctttacaaccattacttacgtcattgtcaggagcacaagttagatccagtcaatgctgcc
tcctttggaaaactcatacggtcaatcttcatgggattacggaccagaagactgggaacc
agggggaactctaaataccattattatgggattcgtgtcaaaccagattctccccttaat
cgtctacaagaggacatgcaatatatggctatgagacagcaacccatgcagcagaaacag
aggtacaagcctgtgcagaaagtggatggcgttccagatggtttcacaggaagtggtcaa
cagacaggcacatctgctgaacaaactataattgcccaaagtcaacatcatcaacagttt
ttagatgcatctcgagtacttccagagtttggagaagttgaaatatcttctctgccagat
ggtactacccttgaggacataaaatcattgcaaagtctttatcgagaacactgtgaggca
atagtggatgttattgtgaatcttcagtttagcctgatagaaaaattgtggcaaactttc
tggcgctattctccctctgctccagctgatgacgcagctattattgaactgagcaatctg
agtgaaatagaaagtcgacttccaaaaggaaaactaattactctgtgcaaaaatgagtct
attctgaaatggatgggtaactgtgaccatgtgatgtaccaggctttggtggagattctc
attcctgatgtccttagacctattcctagtgccttgactcaagccattcgcaattttgca
aaaagccttgaaggttggctttccagtgccatgaacaatattccacagagaatgatacaa
agcaaggttgccactgtaagtgcatttgcccagactttgagaagatacacatctctcaat
cacctggctcaggcagctcgggctgtgcttcagaacacttctcagatcaaccagatgctc
agtgatctcaaccgtgtggattttgccaatgtacaggaacaggcttcctgggtgtgtcag
tgtgatgacaatgtggttcaaagactagaaacagatttcaagatgacacttcagcagcag
agcactctggagcagtgggctgcctggcttgataatgtaatggtgcaagcattgaaacca
tatgaaggaagacccagctttcctaaagcagcgcggcaatttcttttaaaatggtctttc
tacagctcaatggtgattcgagatttaaccttacgcagtgctgctagctttggttctttt
catctgatccgcttgctttacgatgagtacatgttttacttagtcgaacatcgtgttgct
caggcaacaggagaaacacctatcgcagttatgggagagtttggtgatttaaatgctata
tcccctggacatacggataaagatgagggcagtgaagttgaaagtgaaatagaagaagag
atggatgaaaatggagagccacaagccaagagggagaaaacagacttaaaccaagcattt
caggtgggctgcttgcagcagccagtgcttgagagtggaatagagcagagcctcctgaac
ccaattcataatgagcacactgttacaaatactcagactatcagacaatgcagtgctact
ggaaatacatatactgcagtctaa
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