Aphelocoma coerulescens (scrub jay): 138102790
Help
Entry
138102790 CDS
T10543
Name
(RefSeq) zinc finger SWIM domain-containing protein 6-like isoform X1
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
acoe03037
]
138102790
Cilium and associated proteins [BR:
acoe03037
]
Other cilia and associated proteins
Stereociliary proteins
138102790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
DUF6247
SWIM
Motif
Other DBs
NCBI-GeneID:
138102790
NCBI-ProteinID:
XP_068856658
LinkDB
All DBs
Position
W
Genome browser
AA seq
1166 aa
AA seq
DB search
MAERGQLPFPAKRLCCRPGYGSGCRPGQRAGGMGLSSGALCAGPSSATATVAAAAAALGL
LPLGKTQSPESLLDIAARKVAEKWPFQQVEEQFERIPEPVQRRIVYWSFPRSEREICMYS
SFNTGAEDLATAPGGAAAGTAPGGGADIAAVDENRLPFRRGIVLLDGGYVDNVLQVGFHL
SGTVTDPAMQSEPETVCNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQV
KLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEINQVHGAPDP
TAGASIDDENCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARM
LTLITEQFMADPRLSLWTQQGTAMTDKYRQLWDELGGLWMCIVLNPHCKLEQKVSWLKQL
KKWNGVDVCPWEDGNHGNELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACELHWQDS
HLQHIISSDLYTNYCYHEHTENSLFDSRGWPLWHEHVPTACARVDALRSHGYPQEALRLA
IAIVNTLRRQQQKQLEMFQAQKKELLQIGVTSITNLEGWVGHPLDPIGTLFSSLIEACRV
DDESFHGFSDFTENMGECKSLEYQHLPAHKFLEEGESYLTLAVEVALIGLGQQRIMPDGL
YAQEKVCRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEVIHRDSVPMHTF
AKYLFTCLLPHDAELAYKSALRAMRLLVLESMAPLGDTSRPHHIASVVPNRYPRWFTLSH
IESQQCELASTMLTAAKGDVQRLETVLESIQKNIHSSSHIFKLAQDAFKIATLMDSLPDI
TLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATEIGVYALDSIMQNWFTLFTPTEA
TSIVATTVMSNSTIVHLHLDCHQQEKLASSARTLALQCAMKDPQNCALSALTLCEKDHIA
FETAYQIVLDAATTSMSYSQLFTIARYMEHRGYPMRAYKLATLAITHLNLSYNQDTHPAI
NDVLWACALSHSLGKNELAAVIPLVVKSVKCATVLSDILRRCTLTTPGMVGLHGRRNSGK
LMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYSEFIEFLTKARETFLMAHDGHIQF
TQFIDNLKQIYKGKKKLMMLVRERFG
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgtggtcaactccctttccctgctaagcgcctctgttgtagacctggctat
ggctcggggtgcaggccaggccaacgggcgggcggtatgggcctcagcagtggggcgctc
tgcgccggaccctcctccgcaactgctactgtagctgctgccgctgccgctctggggctg
ctaccgctcggcaagacccagagccccgagtccttgctggacatcgcggctcgcaaggtg
gcggagaagtggcccttccagcaggtggaagaacagttcgaaaggatcccagagccggtg
caacgcaggattgtctactggtctttcccccgcagcgagagggaaatctgtatgtactcc
tccttcaacaccggcgccgaggatctcgccaccgcccccgggggggccgccgccggtacc
gcgcccggtgggggcgcggacatcgccgccgtcgacgagaaccgcctgccttttcgccgg
ggcatcgttctgctagatggcggctacgtcgataatgtcctgcaagtcggtttccacttg
agtggcactgtgacagaccctgcaatgcaatcagagccagaaactgtttgcaatgtagct
atcagctttgatcgttgcaagattacctcagttacctgtagctgtggaaacaaggacata
ttttactgtgcccacgttgtggcactctctttataccggatccgcaaaccagatcaggtc
aaacttcatcttcccatttcagagacactgtttcaaatgaacagagaccaactacaaaaa
tttgtacagtatttgatcacagtgcaccacacagaagttttgccaactgctcagaaatta
gcagatgaaattctttctcagaattcagaaatcaatcaagtccatggtgctcctgaccca
acagcaggcgctagcatagatgatgaaaactgctggcatttggatgaggaacaggtccaa
gaacaggttaaactctttctctcccagggtggataccatggatcagggaagcagctcaat
ttgctttttgcaaaggtgcgagagatgctaaagatgagagattcaaatggagctcgcatg
ttgacgttgataacagaacagttcatggctgaccctcgtctatcactttggacacaacaa
ggaactgcaatgactgacaagtataggcaactctgggatgaactgggtggtctatggatg
tgtatagtcttaaatccccactgcaagttggaacagaaggtcagttggctcaaacagctg
aaaaaatggaatggtgtggatgtttgtccctgggaagatggaaaccatggaaacgagctg
cccaatttaaccaatgctttgcctcagggcgcaaatgctaaccaagattcatcaaacagg
ccacatcggacagtgttcactcgagccatagaggcatgcgaactgcactggcaggacagc
cacttacagcacattatcagcagtgacctatacaccaactactgttaccatgaacacact
gaaaactcactctttgactctcgagggtggcccctctggcatgaacatgttcctacagcc
tgtgcgagggtggatgcgttacgatctcatggatacccacaagaagcactgaggctagca
atagctattgttaacacactaagaaggcagcagcagaaacagctggaaatgttccaggct
cagaagaaagaacttctccaaataggagtaacctcaataacaaatcttgaaggttgggta
ggacatcctttggatccaattggcaccctcttcagtagcctgattgaagcctgcagggtg
gatgatgagagcttccatggattctcagacttcacggagaacatgggggaatgcaaatct
ctggagtaccagcacctgcctgcacacaagtttttagaagaaggggaatcttatttaacg
ctggctgtggaagtagcattgatagggctgggacagcaacgaataatgccagatggcttg
tatgcacaagagaaggtttgtcgaaatgaggagcagctcatttccaagctacaggaaatt
gaattggatgatactctggtgaagatttttcgaaaacaagcagtcttcctattagaagct
ggaccatatagtggtttaggtgaagtcatccatcgagacagtgttccaatgcacacattt
gccaagtatcttttcacctgtctcctacctcatgatgctgaattggcatacaaaagtgca
ctgagagccatgcggttgctagtattggaatctatggctcctttgggagatacgtcccgt
ccacaccacattgcatcagttgttccaaaccggtatccccgctggttcaccctaagtcac
atcgaatcccagcagtgtgagctggcatctaccatgctgacagcagccaaaggcgatgtt
cagaggctggaaacagtgttagaatccattcagaaaaatatccactcctcatcacacatc
ttcaaacttgcccaggatgcatttaaaatagcaacgctcatggacagcttgccagacatc
actcttctgaaagtttctctggagttgggccttcaggtgatgcggatgacactgtcaaca
ttgaattggcgacgacgggaaatggtgaggtggttggtaacatgtgcaacagaaataggt
gtttatgcactggatagtataatgcaaaactggtttacgcttttcactccaacagaagcc
actagtattgttgctacaacagtgatgtccaacagcaccattgtccatctgcatctggac
tgtcatcagcaggagaagctggccagcagtgctagaacacttgctctacagtgtgccatg
aaggatcctcaaaactgtgccctctctgcactgactctatgtgaaaaggatcacatagct
tttgagactgcttaccaaattgttctagatgctgctacaaccagcatgagctactcacag
ctttttactatagcacgatacatggagcaccgtggttaccctatgcgggcctataagctg
gccactttggccataacgcatctcaacctgagttacaatcaggacacacaccctgccatt
aatgatgttctctgggcatgtgcgctcagccactcccttgggaaaaatgagctagcagct
gtaatacctctggtggtcaaaagtgtcaagtgtgcaacagtactgtcagatattttgcgc
aggtgtactttgaccactcctggcatggtgggactccatggaaggaggaattctggtaag
ctcatgtcactggacaaagcccctttaagacaactcttggatgccacaatcggagcctac
attaatacaactcattcacgtctcactcacatcagcccacgacactatagtgagtttata
gagttcctcaccaaggcccgagagaccttcttaatggctcatgatggacacatccagttt
acacagtttattgataacctaaaacaaatctacaaaggcaaaaagaaactgatgatgttg
gttcgtgagcggtttggttga
DBGET
integrated database retrieval system
