Aphelocoma coerulescens (scrub jay): 138102888
Help
Entry
138102888 CDS
T10543
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
138102888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138102888
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
138102888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
HEAT_GCN1_C
Cnd3
Cnd1
Motif
Other DBs
NCBI-GeneID:
138102888
NCBI-ProteinID:
XP_068856759
LinkDB
All DBs
Position
W
Genome browser
AA seq
2771 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLIHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARNPNVFREKSMQNRYGVQS
GMMMSQFNISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYA
PQSPAGYMPYSHPPSYTPHPQMQQASVSSPIVTAGMRNLHENKVSSQLSGNSANHHADNS
RHSSNEDYLQMVHRISSDDGDPSVRNAASFSLRSPQSVCSPSGSDGTLKGSRQPLIQQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQDDMLSGLENSSVSEGDIPFNVQYPGQTSKTPVTPQDVNRPLNTAQCL
LQHEQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQQVSQQGAITSYDEVELDALAEIE
RIERESAIERERFSKEVQDKDKPLKKRKQENKPQEVGGATGGNITASQETGSAGNGARPA
LMVSIDLQQAGRADSQATVTQDLDIIKKPEEIKQYNDGFVCVPQEDTVGVLKFKPENHPE
IFRKMSDFGGQKTDIQQNENRQMEFQQNVSRRLESKQNEKKQVEAKRESKHESRQMEVKQ
NENRQTDSKQNQSRQMEMKQNEGKQNNGKQEIRQRPETPKQKNEGRPEMPKHRHDNKRDS
SKPLSDKKIEISRHKLDVKSDPSRIKSESRPDPTKQRPDGRSVSDTPRRDHDSLKQRSED
REESEKYRGDPSKIRRPEYLRSSNKNEHDSKHGIKSDGSKPEKFARKHRHESGESRERFS
SGDQKSRPDSPRIKQEGRGDSSKSRPDKPGFKSQNSKDEQRTDGNKSKVNSNKAHADSKA
EFPSYLLGARSGALKHFVIPKIKRDKDVNVTQESRKTEFKGEQDKVEKIGLVEDLNKGAK
PVVVLQKLSLDDVQKFIKDREDKSRGSCFKPSKNKSSKSNKGSIDQSVLKELPPDLLAEI
ESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESSRKRHKKDRDEAWEYEE
HDRRSSGDHRRSGYCHEGRRTCASGRYRNRSPNDSEMDDYSSPPSLSEVARRMKKKEKQK
KRKAYEPKLTPEEMMDSSTFKRFAASIENILENLEDMDFTAFGDDDEIPQELLLGKHQLS
ELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGSKLSTLLNHNNDTEDEERLWRDL
IMERVTKSADACLTAINIMTSPNMPKAVYIEDIIERVIQYTKFHLQNTLYPQYDPVYRVD
PHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQISSMGI
TPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSD
TDGEPMYIQMVTALVLQLIQCVVHLPSTEKDSNSEEESNKKVDQDVLMTNSYETAMRTAQ
NFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNK
STEMALRVASLDYLGTVAARLRKDAVTSKMDQGSIARILKQVSGGGDEIQQLQKALLDYL
DENTETDASLVFSRKFYIAQWFRDTTMETEKAIKSQKDEDSSEGTHHAKDVETTGQIMHR
AENRKTFLRSIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIYLTQILR
VLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFV
LCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDE
EGIKKLVNETFQKLWFTPTLHHDKEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSE
EDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKGVNSGRLVACITTLFLFSKIRPQL
MVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIK
YGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKGQHQEDPNSTILTANKPA
LLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFA
FIQHPSLMFEQEVKTLYNSILSDKNCSVNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVA
KQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQC
VPYLIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINTCPQDPV
RGFRHDESSNALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTEVNMLLYIADNLACFP
YQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDKKKERKPSSDEETESDSNSGSESK
SEEEASKPRRLRKRVNSDSDSDEENDINAVMKCLPENSAPLIEFANVSQGILLLLMLKQH
LKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSDMANSKITEEVKR
SIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGGGSPKNNAAETEDDESD
GEDRGGGTSGSLRRSKRNSDSTELAAQMNESVDVMDVIAICCPKYKDRPQIARVVQKTSN
GFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIYKKIALTSANKLTNKVVQNLR
SLYAAKDGTSS
NT seq
8316 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcagggattgctagtcttaca
gaccttttgaaccagctgcctcttccatcacctttacctgctaccacaacaaaaagcctg
cttttcaatggacggatagctgaagaggtgaactgccttctggcttgcagggatgaaaac
ttggtttcacagctcatccacagtctcaatcaggtgtcaacagatcacatagaattgaaa
gataaccttggcagtgatgatccagagggagatataccagtcttgctgcaggctgtcctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatatggggtacaaagc
gggatgatgatgtcgcagtttaatatttctcagaattccatgagaggtagtcctgcatct
tctaattatcaacaaaccactatctcacatagcccttccagccggtttgtgccaccacaa
acaagctctggtaacagatttttggcacaacagaacagtccagtgcctagtccatatgct
cctcaaagtcctgcaggatacatgccatattcacatcctccaagttatacaccacatcct
cagatgcagcaagcttcagtatccagtcccattgtcacagctgggatgaggaatctccat
gaaaataaagtttcaagtcaattgtctggaaattcagctaatcatcatgctgataattct
agacatagctcaaatgaagactatctacagatggtgcacaggataagtagtgatgatggc
gatccttcagtaaggaatgctgcatctttttccttgaggtcaccacagtcagtctgctct
ccatctggaagtgatggaacccttaaaggatcaagacaacctttaatccaacagtctcaa
cctccaccttattcatcacctagagatgttcccccagacatattgttagattctccagaa
agaaagcaaaagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaa
aaagctgcaatgtatgatatcattagctctccttccaaggactccactaaacttacatta
agactgtctcgtgtaagatcttcggatatggaccagcaggatgatatgctttctggtttg
gaaaacagcagtgtgtcagagggtgatattccttttaatgtgcagtacccaggacagact
tctaaaacacccgttactccacaggatgttaaccgcccattaaacactgctcagtgtttg
ctgcagcatgaacagacagctttccttcaggcacaacaagtgcctgttttacaacagaac
acttcagttgctgcaaaacaacctcaaactcctgtggtacagacacagcaacaggtttcg
caacaaggagctataacgtcatatgatgaagtagaattggatgcattggctgaaattgag
cggatagaacgtgaatcagctattgaaagggagcgattttcaaaagaagtgcaagataaa
gataagcctctgaagaagcgaaaacaagaaaacaaaccacaggaggttggaggtgctact
ggaggaaatataacagcttctcaggagacaggttctgcaggaaatggggcacgaccagcg
ttgatggttagtattgatctgcagcaagcaggaagagcagactctcaggcaacagtaact
caggatttggacatcatcaaaaaacctgaagaaattaagcagtataatgatggatttgtg
tgtgttcctcaagaagacactgttggagttcttaaatttaaacctgaaaaccatcccgag
atttttaggaaaatgtcagactttgggggccaaaagacagatatccagcaaaatgaaaac
agacaaatggaatttcagcaaaatgtgagcaggcggttggaaagtaaacagaatgagaag
aaacaggtagaagctaaacgtgaaagcaagcatgaaagcagacaaatggaagtgaaacaa
aatgagaacagacaaacagattcaaaacaaaaccagagcaggcaaatggagatgaaacaa
aatgaaggaaaacaaaataatggcaaacaggaaataaggcagaggcctgaaacaccgaaa
cagaagaatgaaggcaggcctgaaatgccaaaacatagacatgataacaagagggactca
agtaaaccattatcagataagaaaatagaaatatctagacataaactagatgtgaaatct
gatccttcaaggataaaatctgaaagtagacctgatccaacaaaacagaggcctgatggg
cgctcagtttctgatacaccaagacgtgaccatgatagcctcaaacaaagatcagaggac
agggaggagtcagagaaatacagaggagatccatccaagatcagaagacctgaatatttg
agatcctcaaacaaaaatgaacatgattctaaacatggtattaaatctgatggttcaaaa
cctgagaaatttgcaaggaaacatagacatgagtctggtgaatcaagggaaaggttttct
tctggggatcagaaatcaagacctgacagccctcgcattaaacaggaaggtagaggagat
tctagtaaatcaagacctgataaacctggttttaaatcacaaaacagcaaggatgaacaa
aggacagatggtaataagagtaaagtaaatagtaataaagcacatgctgacagtaaagca
gagtttcccagttatttgttgggggcaagatctggcgcattgaaacattttgtcattcca
aaaatcaagcgtgataaagatgtcaatgtcactcaggaatcaaggaaaactgaatttaaa
ggtgaacaggacaaagtagagaagattgggctagttgaagatctaaataaaggagctaag
cctgtagttgtccttcaaaagctttcattggatgatgtgcaaaaatttattaaagataga
gaagataaatcaaggggctcttgttttaaacctagcaagaacaagtcatccaaatctaat
aaaggtagcatagatcagtcagtgttaaaggaattacctcctgatctcctggcagaaatt
gaatccaccatgccactttgtgaacgtgtgaaaatgaacaagcgcaaacgtagcacagtt
aatgagaaaccaaaatatgctgaaatcagttctgatgaagacaatgacagtgaagaagct
tttgaatcttctcgtaaaaggcataaaaaggatagagatgaagcttgggagtatgaagaa
catgatagaagaagttctggtgaccataggagaagtggttattgtcatgaaggaaggagg
acttgtgctagtggccgttatcgtaatcgcagtcccaatgactctgagatggatgattat
tcttctcctcctagcctcagtgaggtagctagaagaatgaagaaaaaagaaaaacaaaag
aagaggaaagcttatgaacctaaactaacacctgaagaaatgatggattcttctactttc
aaaagatttgctgcttcaatagagaatattttggaaaatttagaagacatggattttaca
gcttttggtgatgatgatgagattccacaagaattgctactgggaaagcatcagcttagt
gagttgggtagtgaatctgcaaaaatcaaggcaatgggcattatggacaagctctcaaca
gataaaacagtaaaggtcttgaatattttggagaagaatattcaagatggatcaaagctt
tccacgttacttaaccataacaatgacactgaagatgaggagagattatggagagatctt
attatggagagagtgacaaaatctgctgatgcttgtcttactgctatcaatattatgaca
tcaccaaatatgcctaaggctgtatatattgaagacataatagaaagagttattcaatac
acaaaatttcatttgcagaacactctctatcctcaatatgatcctgtgtatagagtggat
cctcatggtggtggtgttttaagttcaaaagcaaaacgtgccaagtgttccacccacaag
caaagagttatagtgatgttatataacaaagtttgtgacattgtcagcagtttgtcagag
ttgctagagatacagcttctcactgatacaactattcttcaaatatcatctatgggaata
acacctttctttgtagaaaatgtcagtgaactacagctatgtgccatcaaattagtgact
gcagtgttctccaggtatgaaaaacataggcagttaatactagaagaaattttcacttcc
cttgcaagactaccaaccagcaagaggagtttgagaaatttcagattaaacagcagtgac
actgacggagagcctatgtatattcagatggtaacagcactagttctgcagcttattcaa
tgtgtggtgcatttgccatcaacagaaaaagattctaattcagaggaggaatcaaacaaa
aaagtggatcaagatgtgcttatgactaactcgtatgaaacagccatgagaacagcacaa
aacttcctttctattttccttaagaaatgtggcagtaaacaaggggaagaagattacaga
ccactgtttgagaactttattcaagatcttctttccacagtcaataaaccagaatggcca
gctgcagagttgctacttagcttattaggaaggctactggttcaccagttcagtaacaaa
tctacagaaatggcattaagagttgcatcgcttgactatcttggaactgtagctgcaaga
ctcaggaaagatgcagtcactagcaaaatggatcaaggttctatagccagaatactcaaa
caggtttcaggaggaggagatgaaattcaacagctgcaaaaggctttgctagattatctg
gatgagaacacagaaactgatgcatcattagtgttttctcggaagttttatatagctcag
tggttccgtgatacaactatggagacagagaaagcaattaaatctcagaaggatgaggat
tcatctgaaggaactcatcatgcaaaagatgttgagaccacagggcaaatcatgcataga
gcggaaaatcgcaaaacatttcttcgcagcatcattaaaactgctccatctcagttcagt
acattaaagatgaattctgatactgtggactatgaagatgcatgtttgattgttcgctac
ttggcctctatgaggccatttgcccagagcttcgatatttacttgacacagattctgcgt
gtacttggtgaaaatgcaattgctgttcgaacaaaagccatgaagtgtctgtctgaggtt
gttgctgtagaccccagtattctagccaggctggatatgcaacgaggagttcatgggcgg
ctaatggataactccactagtgtacgagaagcagctgtggagcttcttggacgatttgtg
ctctgtcgtcctcagcttgctgagcagtattatgatatgctgattgaaagaattttggat
actggtatcagtgtcagaaaaagagtcataaagatacttagggatatctgcattgaacaa
ccaacatttcccaaaattactgagatgtgtgtgaaaatgattcggagagtcaatgatgaa
gaaggcattaagaaattagtaaatgagacattccagaagctctggttcactccaactcta
catcatgacaaagaagcaatgactaggaaaatactaaatatcactgatgtggttgcagct
tgtagagatacaggctatgactggtttgaacagcttcttcaaaatctgttgaagtcagaa
gaggatgcctcatataaacctgtgaaaaaagcctgtactcaacttgttgacaatttggtt
gagcacattcttaaatatgaggaatctttgtcagattctgacaacaaaggtgtgaattct
ggtcgcttggttgcttgcataaccactttgttcttattcagcaaaatcaggccccagcta
atggtcaaacatgccatgaccatgcagccatacctgaccactaaatgtagtacccagaat
gatttcatggtgatctgcaatgttgcaaaaatcttagaacttgtagtgccactaatggaa
cacccaagtgagacatttcttgccactattgaggaagacctcatgaaactcatcatcaaa
tatggcatgacagttgttcagcattgtgtgagctgtcttggggctgttgtgaacaaggtc
actcagaactataaatttgtgtgggcctgttttaatagatactatggtgcactttcaaaa
ttaaaaggtcaacaccaagaagacccaaacagtacaatacttactgccaataaaccagca
ctccttagatcacttttcactgttggagcactgtgtcgacattttgattttgatcaggaa
gattttaagggcaacagtaaggttaacattaaggataaagtacttgaactgctgatgtat
tttacaaagcattcagatgaagaagtacagacgaaagccattattggccttggatttgca
tttatacaacacccaagtttaatgttcgaacaggaagtgaagactctgtacaacagcatt
ctttcagacaagaactgttcagtaaacttaaaaatccaggtgttaaaaaacctccagacc
tacttgcaggaggaggatacacgtatgcagcaggcagacagagactggaaaaaagtagca
aagcaggaagacctgaaagaaatgggtgatatttcctcagggatgagtagttccatcatg
cagctatatctcaaacaggtccttgaggctttctttcatacccagtccagtgtacgccac
tttgctctaaatgtcattgcactgacattaaaccagggtctcatccatcctgttcagtgt
gtgccgtacttaattgctatgggcacagatccagagccctctatgcgaaacaaagctgac
cagcaattggtggaaatagacaaaaaatatgctgggttcattcatatgaaagcagtggct
ggtatgaagatgtcttaccaggtacaacaggcaatcaatacctgcccacaggatcccgta
agaggttttagacatgatgaatcatccaatgcattgtgttcacacctatactctatgatt
cgagggaaccgtcaacacagacgagcctttctaatttccttactcaacctatttgatgat
actgcaaaaacagaggtgaatatgctcttgtacatagcagacaatctagcctgttttcct
tatcaaacacaggaagaaccactgtttataatgcatcatatagacattacactatcagtt
tctggtagcaacctactacagtcatttaaagagtctatggtgaaagacaaaaaaaaggaa
agaaagccttcatcagatgaggagactgagagtgacagtaacagtggtagtgagagcaaa
agtgaggaggaagcttctaagcctcggaggttacggaaacgagtaaactctgattcagat
tctgatgaagaaaatgatataaatgccgtgatgaaatgtttaccagaaaattcagctcct
ttaattgaatttgcaaatgtctcccaaggcatattattacttttgatgctgaaacagcat
ttaaagaacctctgtggattctctgatagtaaaattcagaaatattctccatctgaatct
gcaaaagtgtatgataaagctataaacaggaagacaggagttcatttccatccaaaacaa
actctggattttctgcggagtgatatggctaattctaagatcactgaagaagtgaagagg
agtatagtaaagcagtacttagatttcaagctccttatggaacatttggatcctgatgaa
gaggaagaagatggagaggtgtcagctagcacaaatgctcggaacaaagcaattacctca
cttcttggaggaggcagccctaaaaacaatgcagctgagacagaggatgatgaaagtgat
ggggaggatagaggaggaggcacttcagggtcattgagaaggtcaaaacgaaattcagac
tctacagagttggcagcacagatgaatgaaagtgttgatgtcatggatgtcatcgctatt
tgctgtccaaagtacaaagaccgaccacaaattgcaagagtagtacagaaaaccagcaat
ggcttcagtgttcagtggatggcaggctcctacagtggctcctggactgaggctaagcgc
cgtgatggccgcaaactggtgccttgggtagacactattaaagagtcagacattatttac
aaaaaaattgctctaacgagtgctaataagctgactaataaagttgttcaaaatttacga
tcgctgtatgctgccaaggatggaacttccagctaa
DBGET
integrated database retrieval system