Aphelocoma coerulescens (scrub jay): 138102962
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Entry
138102962 CDS
T10543
Symbol
DHX29
Name
(RefSeq) ATP-dependent RNA helicase DHX29
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
acoe03012
]
138102962 (DHX29)
Enzymes [BR:
acoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138102962 (DHX29)
Translation factors [BR:
acoe03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138102962 (DHX29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_DHX29
OB_NTP_bind
DEAD
DSRM_DHX29
Helicase_C
HA2_C
AAA_22
HA2_N
nSTAND3
AAA_19
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
138102962
NCBI-ProteinID:
XP_068856895
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Position
Z
Genome browser
AA seq
1364 aa
AA seq
DB search
MGGRNKKQRAGGAAHAAAAATAATARAGAAQAGAAAAGGPASRAAPPRPAPASKEPRVKQ
GPKTYSFGSTTDSSTAANLDKSVLKVMINGSLEKRIIDVINKHKNQNDDKGIISKRLTAK
KLQDVYMALQRFSFKTEHIEEAMKNTLLYGGDLHSALDWLCLNLPDDALPEGFSQQFEEQ
QQKPRAKFRSVVSQHGTLPPLEDSKKKENGSETKETNVRKEKELSMKEWILRYAEQQSDE
EKEESVKETEQEKFDPNERYVHLSAKLSEAKEQASISKQDKDKQGQKAAQEKIRRIQQEM
AVLEEHPVFNPSIKISNQQQNEKKKIPSPQPQETTLNLSLLEKPDGAAKEDKVKKREPLD
IRNFDYSARSWTGKSPKQFLIDWCRKNFPKSPNPAFEKIPVGKYWKCRVRIIKSSDDVMA
MCPTIVTEDSMQAQHLAATLALYHLTKGQSVHQLLPPTYRDVWLEWRDIEKKKEEESKIE
TNKPRDTFIARLLNKLKQQQQLQSENQPKLSEGPEDSWENLVSDEDFSSLSLETSDTDNL
EPSRILFKKLQSSSRYQRLLKERQELPVFKHRYSIVETLKKHRVIVVAGETGSGKSTQVP
HFLLEDLLLDEGSKKCNIVCTQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMES
RTGEATRLLYCTTGVLLRKLQEDGLLSSISHVIVDEVHERSVQSDFLLVILKEILHKRSD
LHLILMSATVDSEKFSSYFSHCPILRISGRSYPVEIFHVEDVIEATGYVLEKDSEYCQKF
LEEEEEVTINVTGKGGSTTKHQEYVPIQSGSGIDLAPHYAKYSSRTQQAILYMNPYKINL
ELILELLAYLDRSPQFKNIEGAVLIFLPGLAHIQQLYDLISTDRRFNLRDRHRLIALHSV
LSTQDQAAAFTIPPLGIRKIVLATNIAETGITIPDVVFVIDTGRTKENRYHESSQMSSLE
ETFISKASALQRQGRAGRVRDGFCFRMYTRDRFESFMEYSVPEILRVPLEELCLHIMKCS
LGSPEDFLSRALDPPQQQVIGNAMNLLRKIGACQLHVPKLTPLGQHLAALPVNVKIGKML
IFGAIFGCLDPVATLAAVMTEKSPFTTPIGQKDEADLAKSSLAMAVSDHITIYNAYLGWK
RARQEGGYRAEMTYCRRNFLNRTSLLTLEDVKQELIRLVRAAGFTAPSMQCGWDGNGATQ
SPSLSEIALLKAVLTAGLYDNVGKILYAKSVDITEKLACMVETAQGKAQVHPSSVNRDLQ
TYGWLLYQEKVRYARVYLRETTLISPFPILLFGGDIEVQHRERLLTVDGWIHFQAPVKIA
VIFKQLRVLIESVLKKKLENPKMSLEDDKVLYIIKELIKTENGN
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgggcggccgtaacaagaagcagcgcgcgggcggcgcggctcatgcggctgctgctgcc
accgccgccaccgcccgcgccggcgccgcccaggccggggcagccgcggccgggggtccg
gccagccgggctgccccgccgcgaccagcacctgcctccaaggagccgcgtgtcaaacaa
ggtccaaaaacttacagttttggttcaacaacagattccagtactgctgcaaatctagat
aaatctgttcttaaggtaatgataaatggtagtttggagaaaaggattatcgatgtgatt
aacaaacataaaaaccaaaatgatgacaaaggaattatttccaaaagactaactgcaaag
aaactacaggatgtgtacatggctttacaacgattctcttttaagactgagcacattgaa
gaagcaatgaaaaatacacttctatatggcggcgatcttcactctgcacttgactggctt
tgtttaaaccttcccgatgatgccttgcctgaaggttttagccagcaatttgaagaacag
cagcagaaacctagagcaaaatttcgttctgttgtgtcacaacatggaacactgcctccc
ttagaagacagcaaaaagaaagaaaatggctctgaaactaaggaaacaaatgtgaggaaa
gagaaagaattgagtatgaaggaatggattttgcgatacgccgagcaacagagtgatgaa
gagaaggaggagtctgtgaaggagacagagcaagaaaaatttgacccaaatgagaggtat
gtacatctgtctgccaagctttcagaagcaaaagaacaagcaagcatctccaagcaagac
aaagacaagcaaggccagaaagcagcacaagaaaaaataagaagaattcagcaagaaatg
gcagtacttgaggaacatccagtatttaatccatctataaagatttcaaaccaacagcaa
aatgaaaagaaaaaaattccctcacctcaacctcaagaaaccactttgaatttgagtttg
cttgaaaaacctgatggtgctgcaaaggaagacaaagtgaaaaagagggaaccactggat
ataagaaattttgattatagtgctcgaagctggactggtaaatctccaaaacaatttttg
attgactggtgcagaaagaattttcccaagagcccaaatcctgcttttgaaaaaattccc
gttggaaaatattggaaatgtagggtaaggattatcaagtcatcagatgatgtaatggca
atgtgtcctacaattgtaacagaagatagtatgcaagcacagcatctagctgctactttg
gcactctaccatttaaccaaaggacaatcagttcatcagttgctgcctcctacctaccga
gatgtctggctagaatggagggatattgaaaagaaaaaggaagaagaaagcaagatagaa
accaacaagccacgtgatacctttattgctagattattaaacaaactcaaacaacaacag
cagctacagtctgaaaatcagccaaaactatctgagggtcctgaagattcctgggaaaac
ttagtttctgatgaggacttcagcagtctctcccttgagacctcagatacagataatttg
gaaccttcaaggattttgtttaagaagctgcagagttcctccagataccagaggcttctg
aaagagagacaggagttacctgtgtttaagcacagatactcgattgtagaaactcttaaa
aaacatcgagtaattgttgttgctggtgaaacaggcagtgggaagagtacccaggtgccc
cattttttgttagaagacttgttgctagatgaaggatcaaaaaaatgcaacatcgtttgc
acacaaccccgaagaatctcagcggtgagtctggcaaccagggtttgtgaagagctgggc
tgcgaatcaggaccaggaggaaaaaattccctgtgtggatatcaaattcgtatggaatca
agaacaggagaagccaccagactactgtactgtacgacaggtgtcctgcttcgaaaactt
caagaagacggtcttctttcaagtatatctcatgttattgtagatgaggtacatgaaaga
agtgtccagtctgatttcttgctagttattctgaaagagatcttgcataagcgttcagac
ctgcatctgattttaatgagcgccactgtagatagtgagaagttttccagctatttctca
cactgtcccattttaaggatctcagggaggagctaccctgttgagatttttcatgttgaa
gatgtaattgaagcaactggctatgttttggagaaagactcagaatattgtcagaagttc
ttggaggaggaggaggaagtaacaataaatgttaccggtaaaggaggaagcactacaaag
caccaggagtatgtcccaattcagtctggatctggtatcgatttggctcctcactatgcg
aagtatagcagtcgtacacagcaggctatcttatacatgaacccttacaagatcaacctt
gaacttattttggagttgcttgcatacttagatagaagtccccagttcaagaacattgaa
ggtgctgtgctgatctttttaccaggccttgctcacatccaacagctgtatgatctcatt
tcaactgacagaagatttaacttgcgtgacaggcacagattgatagctctgcattctgtt
ctttccactcaagatcaagcagctgcatttacaatacctcctcttggtattagaaagatt
gttttggcaaccaatatagcagagacgggtattacaataccagatgttgtctttgtgatt
gatactgggagaacaaaagaaaataggtatcacgaaagcagtcagatgagttccctggaa
gagacctttattagtaaagctagtgctctgcagcggcaaggaagagctgggcgtgttagg
gatgggttctgcttccgaatgtacacgagagacaggtttgaaagtttcatggaatattct
gttccagaaatactgcgtgtgcctttggaggaattatgccttcatattatgaaatgtagt
cttggctctcctgaagattttctttccagagcgttagatccgccacagcagcaagtaatt
ggtaatgcaatgaacctgttgaggaagattggggcttgtcagttacatgtgcccaagctg
actccattgggccagcaccttgcagcccttcctgttaatgtaaagattggcaaaatgctt
atatttggtgctatatttggctgcttggatcctgtggcaactctggctgctgttatgaca
gaaaaatccccatttactacacctattggtcaaaaagatgaagcagatcttgcaaaatca
tctctagctatggcagtttcagaccatataacaatctacaatgcttatctggggtggaaa
agggctcgacaggaggggggatatcgtgctgaaatgacttattgcagaagaaattttctt
aataggacgtcgctgttaactctggaggatgtgaagcaagagctcataaggctggtcaga
gcagcagggttcacagcaccttcaatgcaatgtggatgggatggaaatggagccacacaa
tccccgtctctcagtgaaatagctcttcttaaagctgtgttgactgcagggctctatgac
aatgtaggaaaaatactatatgcaaagtctgtggatattacagagaagctggcttgcatg
gtagaaactgctcagggtaaagcgcaagttcatccttcctctgtaaatcgagacttgcag
acatatggatggctgctttaccaggagaaggtgaggtatgccagggtgtatctgagagag
actactttaatatccccctttcccatattgctttttggtggggatatagaagtgcagcat
cgtgagcgtctcctgacagttgatggttggatccattttcaggctcctgttaagatagca
gtaattttcaaacagctgagagttctcattgagtccgttttaaagaagaagcttgaaaat
cccaaaatgtcacttgaagatgacaaagtcttatacatcatcaaagagctgataaaaaca
gaaaatggtaactga
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