Aphelocoma coerulescens (scrub jay): 138103007
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Entry
138103007 CDS
T10543
Symbol
SEMA6A
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
acoe Aphelocoma coerulescens (scrub jay)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF3481
Motif
Other DBs
NCBI-GeneID:
138103007
NCBI-ProteinID:
XP_068857018
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Position
Z
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AA seq
1027 aa
AA seq
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MRSEALLLYFTLLHFAGAGFPEDSEPISISHGNYTRQYPVFVGHKPGRNTTQRHRLDIQL
VMVMNRTLYVAARDHIYTVDMDTSHTEEIYFSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLKRNEDTLFICGTNAFNPSCRNYKMDTLEYLEEEFSGMARCPYDAKHANVALFAEG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGNYIYFFFREIA
VEYNSMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQSVT
DVIHFNGRDVVLATFSTPYNSIPGSAVCAYDMLDIANVFTGRFKEQKSPDSTWTPVPDER
VPKPRPGCCAGSTSLEKYVTSNEFPDDTLNFIKTHPLMDEAVPSIVNRPWFLRTMVRYRL
TKIAVDSAAGPYQNYTVVFLGSEKGIILKFLARMGNTGFLNDSLFLEEINVYNPEKCSYD
GLEDKRIMGMQLDKPSSALYVAFSTCVIKVPLGRCERHGKCKKACIASRDPYCGWVKESG
VCTQLVLGSKLAFEQDVERGNTDGLGDCQNSFVALNGHSSSLVPSTTTSDSRARQGYDAR
GRMLDWKDPLGSSENTDPYVAVSSHNHQDKKGVIRESYLKGHDQLVPVTLLAIAVILAFV
MGAVFSGIIVYCICDHRRRDMAAVQRKEKELTHSRRGSMSSVSKLSGLFGDAQSKEPKPE
AILTPLMHNGKLATPGSTAKMLIKADQHHLDLAALPTPESTPTLQQKRKPSRGSREWERN
QNLINACTKDIPSMASPVIPTDLPLRASPSHIPSVVVLPIAQQGYQHEYVDQPKMSDGAQ
MSVEDQNATLEYKTIKDHLSSKSPSHGVNLVENLDSMPPKVPQREASLGPPGASLSQSGL
SKRLEMHSSAYNVDYKRSYPTNSLTRSHQASTLKRNNTNSSNSSHLSRNQSFGRGDNPPP
APQRVDSIQVHAAQAQAVTVSRQPSLTAYNSLTRSGLKRTPSLKPDVPPKPSFAPLSTSM
KPNDACT
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcagaagccttgctgctatatttcacactgctacactttgctggggctggtttc
ccagaagattctgagcctatcagtatttcgcatggcaactatacaagacagtatcccgtg
tttgtgggtcacaaaccagggcggaacaccacacagaggcaccggctggacatccagctt
gtcatggtcatgaacaggaccctctacgttgctgctagggaccatatttatactgttgat
atggacacatcacatacagaagaaatttattttagcaaaaaattgacatggaaatctaga
caagctgatgtagacacatgcagaatgaagggaaaacataaggatgaatgtcataacttt
attaaggttctcctaaaaagaaatgaggacacgctgtttatctgtggaacgaatgcattc
aacccttcttgcagaaactacaagatggataccttggagtacctggaagaagaattcagt
ggaatggccaggtgcccctatgatgcaaagcatgccaacgttgcgttgtttgcagaggga
aaactgtattctgccacagtgaccgacttccttgcaatagatgcagtaatataccggagc
cttggagacagcccaaccctgcggacagttaaacatgactccaagtggttgaaagaaccg
tactttgttcaggcagttgactatggcaattacatatacttcttcttccgggaaatagca
gtggagtacaacagcatgggaaaggtcgttttcccgagggtggcccaggtttgcaaaaat
gacatgggaggatctcagcgagtgctggaaaaacagtggacttcctttctcaaggctcgg
ttgaactgctcagttcctggcgactcacacttctactttaacatactgcagtcagttaca
gatgttatccatttcaatggccgggatgttgttttagcaacattctctactccatataat
agcatccctggctctgcagtctgtgcctatgacatgcttgacattgccaatgtgtttact
gggaggtttaaagaacaaaagtctccagattccacatggacaccagttccagatgaacga
gtgcccaagcccaggcctggttgctgtgctggctctacatcattagaaaaatatgtaaca
tctaatgagttcccagatgatactctgaacttcatcaaaacacatccactgatggacgag
gctgtaccttccattgtcaatcgaccctggttcctgagaacaatggtcagatatcgcctg
accaaaattgctgttgactctgctgctgggccgtatcagaactacactgtggttttcttg
gggtcagagaagggaatcatcctgaagttcttggcacggatgggaaacactggtttccta
aatgacagccttttcctggaggagatcaatgtttacaatcctgaaaagtgcagctatgat
ggcttggaggacaagcggatcatgggcatgcagcttgacaagcccagcagcgccctgtac
gttgccttctccacctgtgtcatcaaggttcccctgggacgttgcgagcgccacggcaaa
tgcaaaaaggcctgcatagcgtccagagacccgtactgcggatgggtgaaggaaagcggg
gtgtgcacgcagctggtccttggctccaaactggcatttgaacaggacgtagaacgtggc
aatacagatggcctgggtgactgccaaaattccttcgtagccctgaatggacactccagt
tccctagtcccaagcaccaccacttctgactctcgcgctcgacagggttatgatgctagg
ggacgcatgctggattggaaggatccgcttggttcatctgaaaatacagatccatatgtg
gcagtttcatcccataatcatcaagacaagaagggagtgattcgcgagagttacctgaaa
ggtcatgatcagctggtgccagtcaccctgttggccattgctgttattcttgcttttgtc
atgggggccgtcttttcgggaatcatagtgtactgcatctgcgaccaccgccgcagagac
atggctgctgtgcagaggaaggagaaggagctgacccactcccgccgtggttccatgagc
agtgtttccaagctcagtggcctctttggggatgctcagtccaaggagccaaagcctgaa
gctatcctcacacctctgatgcacaatggcaagctggctaccccaggcagcactgcaaag
atgctaatcaaagctgaccagcaccatctggacctggctgccctgccaaccccggagtcc
accccaaccctgcaacagaagagaaagcccagccgaggcagtagggaatgggagagaaac
cagaacctcatcaatgcctgcacaaaagatatcccctcgatggcctccccagtgatccca
actgacctgccgctcagggcttctcccagccacatccccagtgttgtggtcctgcccata
gcccagcaaggctaccagcatgagtatgttgaccagccaaaaatgagcgatggggctcag
atgtctgtggaggaccagaatgccacccttgagtacaaaactatcaaggaccacctcagc
agcaaaagccccagccacggagttaacctggtggaaaatcttgacagcatgccaccgaaa
gtcccccagcgggaggcatccctggggcccccgggtgcctcgctgtcacagagcggcctg
agcaagcggctggagatgcactcttctgcttacaacgtggactacaagagaagctacccc
acaaactccctcacgagaagtcatcaggcatcaaccctcaaaagaaacaacactaactcc
tccaactcatcccacctctcccgcaatcagagctttggccggggtgacaacccaccgccg
gccccgcagcgagtggactccatacaggtccacgctgctcaggcacaggctgtgactgta
tcccggcagccaagtctcactgcctacaactcactgacgaggtcaggcttgaaacgcacg
ccctcactaaagccagacgtacctcccaaaccttcctttgctccgctttccacatccatg
aagcccaatgatgcatgtacataa
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