KEGG   Aphelocoma coerulescens (scrub jay): 138103027
Entry
138103027         CDS       T10543                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03420  Nucleotide excision repair
acoe04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    138103027 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    138103027 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:acoe04121]
    138103027 (ERCC8)
   03400 DNA repair and recombination proteins [BR:acoe03400]
    138103027 (ERCC8)
Ubiquitin system [BR:acoe04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     138103027 (ERCC8)
DNA repair and recombination proteins [BR:acoe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      138103027 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd WDR55 Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML ANAPC4_WD40 WD_LRWD1 NBCH_WD40 Beta-prop_IFT122_1st WD40_RFWD3 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_LRRK2 Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_SCAP eIF2A Beta-prop_DCAF4 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 138103027
NCBI-ProteinID: XP_068857065
LinkDB
Position
Z
AA seq 400 aa
MLGLMAARQAGLDDPARLRRAERTRRVLSLELNKDRDVERIHGSGINTLDIEPVEGRYML
SGGSDGVIVLYDLENLSRKPSYTCKALFTVGRSHPDVHKFSVETVQWYPHDTGMFTSSSF
DKTLKIWDTNTLQPADIFHFEGTVYSHHMSPVATKHCLIAVGTKSPKVQLCDLKSGSSSH
ILQGHRQEVLAVSWSPRHEYILATGSADGRVKLWDVRRASGCLSTLDQHNGEKSKASSEA
AANTAHNGRVNGLCYTNDGLHLLTIGTDERMRLWNSSTGENTLVNYGKVCNESRKGLKFA
ISCGCNPEFAFVPYGSTIAVYAVFTGELITMLRGHYSTVNCCVFQPHFQELYSGSKDCNI
LAWIPAPREPVPDDISEKSLPQQHLNPAYEDAWSSSDDEG
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgttggggctcatggctgctcgccaggccgggctggacgaccccgcgcggctgcgccgg
gccgagcgcacccggagggtcctaagtttggaattaaataaagatagagatgtggaaaga
atacatggaagtggtattaacaccctcgatattgagcctgttgagggaagatacatgtta
tctggtggatcagatggtgttattgtactttatgaccttgaaaacttgagcaggaaacca
agttacacatgtaaagcactttttactgttggaaggagtcatcctgatgtacataaattc
agtgtggagacagtccagtggtatcctcatgacacaggcatgtttacatccagctcattt
gataaaaccttgaaaatatgggatacaaatactttacaacctgcagatatatttcacttt
gagggaacagtctatagccatcacatgtctccagttgctacaaagcattgtttaatagca
gttggtaccaaaagccccaaagtacagctctgtgacttgaagtctggatccagttctcac
attctgcagggtcacaggcaggaagtgctggcagtttcttggtccccacgtcacgaatat
attttggcaacaggaagtgctgatggtagagtaaaattatgggatgtgaggagagcttcc
ggatgtctgagtacacttgatcagcacaatggagaaaagtccaaagcgtcttctgaggca
gcagcaaacactgctcacaatgggagagttaatggtttatgctatacaaatgatggactt
cacctgttaaccattggtacagatgagcggatgcgactctggaacagctccactggagaa
aacaccttagtgaactatgggaaagtctgtaatgaaagtaggaaaggactcaaatttgcc
atctcttgtggttgtaatccagagtttgcctttgttccatatggaagtaccattgctgtt
tatgcagttttcacaggagaactgataactatgcttagaggacattatagtactgtcaac
tgctgtgtatttcaacctcattttcaggaactttatagtggtagcaaagactgcaatatc
cttgcatggataccagctccacgagagccagttcctgatgatatttctgaaaagtctctg
cctcaacaacatttaaatccagcatatgaagacgcatggagcagcagtgatgatgaaggc
tga

DBGET integrated database retrieval system