KEGG   Aphelocoma coerulescens (scrub jay): 138103145
Entry
138103145         CDS       T10543                                 
Symbol
WDR7
Name
(RefSeq) WD repeat-containing protein 7 isoform X2
  KO
K24738  rabconnectin-3b
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    138103145 (WDR7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:acoe04131]
    138103145 (WDR7)
Membrane trafficking [BR:acoe04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    138103145 (WDR7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EML CFAP251_N ASA1 EIF3I Beta-prop_ACSF4 Beta-prop_IFT140_1st DSE1_N Beta-prop_DCAF12 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_NOL10_N Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 PAC11 Beta-prop_SCAP Beta-prop_WDR19_1st WDR72_alpha-sol Beta-prop_TEP1_C WDR90_beta-prop_4th Tricorn_2nd PD40 Beta-prop_DCAF4 zf-MYND
Other DBs
NCBI-GeneID: 138103145
NCBI-ProteinID: XP_068857291
LinkDB
Position
Z:complement(943321..988531)
AA seq 1481 aa
MAGNSLVLPIVLWGRRAPTHCVSSLLLVDDSVIVTGCHDGQICLWDLGADLQINPRALLF
GHTASVTCLSKASASSEKQYIVSASESGEMCLWDVNDGRCIEFTKLACAHTGIQFYQFTV
GTQREGRLLCHGHYPEILVVDATSLEVLYSLISKISPDWISSMTIIRSNRTQEDTVVAVS
VTGILKVWIITSEVGRLQDTTPVFEEESKPIYCENCQSISFCSFTQRSLLVVCSKYWRVF
DAGDYSLLCSVPSENEQTWTGGDFVAADKVIVWTEDGQSFIYKLPASCLPASDSFRRDVG
KAVENLIPPLLYSVLDRADKQLLICPPVTRFFCGQREFSYRLLIQGDSSGRLCIWSVPDT
LDQQEGAKGLQTTTSISLQEAFDQLSPRPAGIIDQLSIVPNVSEPLRVTASVYIPAHGRL
VCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSSRYD
QRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDHS
VGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGI
TAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNVAHQKLQTLATNLLASEAS
DKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALVSPENLQ
KASGGSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEDEDEEAMRQRREDGDPEYR
SSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNSVLDELCLDRLGMLKPHCTVSFGLLSRG
GHMSLMLPGYNQPVGKAAFEELGRKMSVTEGLGKGTYGVSRAVTTQHLLSVISLANTLMS
MTNATFIGDHMKKGPTRPPRPGTPEMGKVKPPPPMSSHAAQGQIKQVAPAAASSTESGHS
DTSAFHSCFLVNEGWSQLAAMHCVMLPDLLGLEKFRPPLLEMLARRWQDRCLEVREAAQA
LLLAELRRIEQAGRKETIDAWAPYLPQYMDSVISPGVTTEALQTGTATPDPSGTEAKVQE
EEHDLVDDDIAAGCPSGLPQPKKVSTSYEERRKQATAIVLLGVIGAEFGAEIEPPKLLTR
PRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSARLPAHSTIRRTAIDLIGRGF
TVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIATARPPA
FITTIAKEVHRHTALAANTQSQQNIHTTTLARAKGEILRVIEILIEKMPTDVVDLLVEVM
DIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHGSVALYDIRTGKCQT
IHGHKGPITAVAFAPDGRYLATYSNSDSHLCFWQMNTSLLGSIGMLNSAPQLRCVKTYQV
PPVQPASPGSHNALRLARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4446 nt   +upstreamnt  +downstreamnt
atggcagggaacagcctggtgctgcccatcgtgctgtggggccggcgtgcccccacccac
tgcgtgtcctccctgctgctcgtggatgactctgtcatcgtcaccggctgccacgacggg
cagatctgcctctgggacctgggtgctgacctgcagatcaatcccagagctctgctcttt
ggtcatacagcctcagttacttgtttatccaaggcctcagcttccagtgaaaagcaatat
atagtgagtgcatcagagagtggggagatgtgcctgtgggatgtgaacgatggcaggtgc
atcgagttcaccaagctggcctgtgcacacaccggcatccagttctatcagttcacagtc
ggcacgcagcgggaagggaggctcctatgccatggacattaccctgaaattctggtcgtg
gatgcaaccagccttgaagtgctttattctttgatatccaagatctctcccgactggatc
agctccatgaccatcatccggtccaacaggacacaagaggacactgtcgtggctgtgtct
gtgactggcatcctcaaagtctggatcatcacctcagaggtcggccggctgcaggacacc
accccagtgtttgaggaggaatccaagcccatctactgcgagaactgccagagcatttcc
ttctgctccttcacccagcgctcgctcctggtcgtgtgctccaagtactggagggttttt
gatgctggagattattccctcttatgttcagtccccagtgaaaatgagcagacctggact
ggtggggactttgtggcagctgataaagtgattgtatggacagaggatggacaaagtttc
atctataaattaccagccagctgcctgccagccagtgattcattccgcagggatgtgggg
aaagcagtggaaaacttgattccacctttattgtacagcgtgttggacagagcagataaa
cagctcctaatatgtcctccagtgactcggttcttctgtggccagagagagttttcctac
aggctcttaatccaaggagactcctcagggagactgtgcatttggagcgtgcctgacacc
cttgaccagcaggagggtgcaaaaggcctgcaaacaaccacctccatatccctccaggaa
gcttttgaccagctgagccctcgtcccgcggggatcatcgaccagctgagcatcgttccc
aacgtgagcgagccgctgcgggtgacggccagcgtgtacatcccggcgcacgggcggctg
gtgtgcggccgcgaggacggcagcatcgtcatcgtgccggccacgcagaccgccatcgtg
cagctgctgcagggagagcacatgctgcgcagaggctggccccctcaccggacgctccga
ggccaccggaacaaggtcacgtgtttgctgtaccctcaccaggtctcctcccgctacgac
cagaggtacctgatctcaggcggggtagatttctccgtcatcatctgggacatcttctcg
ggagagatgaaacatatcttctgtgtccacgggggagaaatcacccagctgcttgttcca
ccagaaaactgcagtgcaagagtccagcactgtatttgctccgttgccagtgatcactct
gtgggtctgctgagtctgagggagaagaaatgcatcatgctggcatcccgccacctcttc
ccaatccaagtgatcaagtggaggccgtccgatgactacctggtggtgggatgctcggat
ggctccgtgtacgtctggcagatggacactggggcgctggacaggtgcgtgatggggatc
acggcggtggagatcctgaatgcctgcgacgaggccgtcccggcggccgtggactcgctg
agccaccccgccgtgaacctgaagcaggccatgacccgccgcagcctggctgccctcaag
aatgtggcccaccagaagctccagaccctggccaccaacctgctggcctccgaggcctcg
gataaggggaatttaccaaaatactcccataactccctgatggttcaggccatcaagacc
aacctaacagacccagacatccacgtgctgttcttcgacgtggaggccctgattatccag
ctgctgacggaggaggcctcccggcccaacaccgcccttgtctcgccagagaatttacag
aaagcctccggtggctctgacaagggaggctccttcctcactggcaaacgagcggccgtg
ctcttccagcaagtcaaggaaaccatcaaggagaacatcaaggagcaccttctcgatgat
gaagatgaggatgaagaggccatgaggcagaggagagaagatggcgacccggagtatcgc
tccagcaaatccaaaccactgactttgttggaatataatctaaccatggatacagccaag
ctcttcatgtcctgcctgcacgcctggggcctgaactctgtgctggacgagctctgcctg
gatcgcctcgggatgctgaagccgcactgcaccgtgtccttcggcctcctgtcccgaggt
ggccacatgtctctgatgctccctggctacaaccagcctgtgggcaaggcagccttcgag
gagttaggcaggaaaatgtccgtgacggaaggcctgggaaagggcacgtacggagtgtcc
cgggccgtcaccacgcagcacctgctgtccgtcatctccctggccaacacgctgatgagc
atgaccaacgccaccttcatcggggaccacatgaagaagggccccaccaggccgcccagg
ccgggcacccctgagatgggcaaggtgaagccaccccctccgatgtccagccacgcagca
caagggcaaatcaaacaagttgctcctgctgctgcttccagcacggaatctgggcactct
gacacttctgctttccattcctgtttcttagtcaacgaaggctggagccagctggctgcc
atgcactgcgtgatgctcccggacctgctggggctggagaaattccggcctcctctcctg
gagatgctggcacggcgctggcaggatcggtgcctggaggtgcgggaggcggcgcaggcg
ctgctgctggcggagctgcgccgcatcgagcaggcggggcgcaaggagaccatcgacgcc
tgggctccctacctgccccagtacatggacagcgtcatctcccctggagtgaccacagaa
gcccttcagactgggactgccaccccggatccctcaggaacagaagccaaagtccaggag
gaggagcacgacctggttgatgatgacatcgcagcaggctgcccctccggcctcccgcag
cccaagaaggtgtccacgtcctacgaggagaggcgcaagcaggccacggccatcgtgctg
ctgggagtcatcggcgccgagttcggggctgagatcgagccgcccaagctgctcacgcgg
ccccggagctccagccagattcccgagggattcggcctgaccagcggtggatccaattat
tccctggccaggcacacgtgcaaggcgctgacgttcctgctgctgcagccgcccagcgcg
cggctcccggcgcacagcaccatccgcaggaccgccatcgacctcatcggccgcggcttc
accgtctgggagccctacatggacgtgtcggccgtgctcatggggctgctggagctctgc
gccgacgccgagaagcagctggccaacatcacaatggggctgcccctgagcccggcggcc
gactcggcgcgctcggctcgccacgcgctgtccctcatcgccactgcccgcccgcccgcc
ttcatcaccaccatcgccaaggaggtgcacaggcacacggcgctggcggccaacacacag
tcgcagcagaacatccacaccaccacgctggcccgcgccaagggcgagatcctcagggtc
atcgagatcctcatcgagaagatgccaacggacgtcgtggacctgctggtggaggtgatg
gacatcatcatgtactgcctggaaggatctttagttaagaaaaagggtcttcaggaatgc
tttccagccatctgcaggttctacatggtgagttactacgagcgcagtcaccggatcgcg
gtgggagctcgccacggctccgtggcactctacgacatccgcaccggcaagtgccagact
atccatggccataaaggaccgatcactgccgtggcttttgcccccgacggccggtacctc
gccacgtattccaactccgacagccacctgtgcttctggcagatgaacacctctctcctg
ggaagcattggaatgctcaactccgcgcctcagctgcgctgcgtcaagacctaccaggtg
ccgccggtgcagccggcgtcccccggctcccacaacgcgctccggctggcccggctcatc
tggacctccaaccgcaacgtcatcctcatggcccacgacggcaaggagcaccgcttcatg
gtctag

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