Aphelocoma coerulescens (scrub jay): 138103190
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Entry
138103190 CDS
T10543
Symbol
ZFR
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoe03041
]
138103190 (ZFR)
Spliceosome [BR:
acoe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
138103190 (ZFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
138103190
NCBI-ProteinID:
XP_068857388
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Position
Z
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AA seq
1072 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYT
VHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQ
EAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAAAQPQPSVAESY
YQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVP
SYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQQKQAAAAAAAAAATAAWT
GTTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKA
SQNTNNNSTSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTE
PNVVTQATSSTSTSASKPTASASNIATSSSTVNSSVASSAVKILTPTANTPLNTASNNKT
SSTAANIAVKKISTPKINFVGKYRSGNKLQTTGSKMEEMKSAESVKTPPAAAVQTQEVKP
DTAAEPVTPTTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLK
GRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRY
EEDMYWRRMEEEQHHWDDRRRIPDGGYPHGPPGPLGLLGVRPGMPPQPQGPAPLRRPDSS
DDRYVMTKHAAIYPTEEELQAVQKIVSITERALKLVSDSMTDHEKSKNKEGDDKKDGSKD
RALKGVLRVGVLAKGLLLRGDRNVNLVLLCAEKPSKTLLSRIAESLPKQLAVISPEKYDI
KCAVPEAAIILNSCVEPKMQVTITLTSPVIREENMRDGDVTSGMVKDPPDVLDRQKCLDA
LAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQ
SPGDALRRVFECISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSSAQFALRLLA
FRQIHKVLGMDPLPQMNQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgcccggtagtttcgttcacctatgtgcccagccggctgggggaagat
gccaaaatggccaccggcaactactttggattcacccacagcggggctgctgcccagtac
agccagcagccagcttcgggtgtagcctattcccatccaaccacagttgccagctacact
gtccaccaggccccagtggcggcacacacggtcactgcagcctatgccccagcagcagcc
acggtggcggtggccaggcctgccccagtggccgtggcagctgctgccacagctgctgcc
tatggcgggtatcccacggcacacacagctacggactatggctacacacagcggcaacaa
gaagctccaccaccaccacctcctgtcaccacgcagaattaccaggattcctactcttac
gttcgatctactgcgccagctgtggcttatgacagcaaacaatattaccagcagccaacc
gcgaccgcggcagccgtggctgctgctgcccagccgcagccgtcagtggctgagtcctac
taccagacagctccgaaagcaggatatagccaaggggcaactcagtacacccaagcccag
caaacacggcaagtgacagctataaaacctgcaaccccaagtccagcaacaacgacattt
tccatatatccggtgtcctcgactgtgcagccagtggcagctgcagccactgttgttcca
tcctatactcagagtgcgacatacagcacaacagcagtaacttactctggtacctcctat
tctggctatgaagctgcagtgtattcagctgcatcgtcctattaccaacagcagcagcag
cagcaacagaaacaggcagcagcagcagctgctgctgctgctgcaacagctgcatggaca
gggaccacctttactaaaaaggcaccattccaaaataagcaactgaaaccaaaacagcct
cccaaaccaccccagatccactactgtgacgtttgcaagatcagctgtgctggaccacag
acttataaagaacacttagaaggccagaaacacaaaaagaaagaagcagcattaaaagct
tcccagaacaccaataacaacagtacttctgctcgtggaactcagaatcagttgcgctgt
gagctttgtgatgtgtcttgtactggggcagatgcttatgctgcccatatccgtggagcc
aagcatcagaaagtagtaaagttgcacacaaaacttggcaaacccattccttcgactgaa
ccaaatgtggttacccaagctacttcctcaacatccacatctgcttccaaaccaactgcc
tctgcttcaaatatagcaaccagcagcagtacagtgaactcctctgttgcatcctctgca
gtgaaaattcttactcccacggcaaacacaccacttaacactgcgtccaacaacaaaaca
tcttcaactgctgctaatatagctgtaaagaaaatatctacaccgaaaataaactttgtt
ggcaagtacagaagtggcaataagcttcagacaacaggaagtaaaatggaagaaatgaaa
tcagctgaaagtgttaaaacacctcctgctgctgcagtacaaacacaggaagtaaaacct
gacacagcagctgaaccagtgactcccacaactcttgctgccttgcaaagtgatgtccaa
ccagtgggccatgactatgtggaggaggtaaggaatgatgaaggaaaggtgatccgcttt
cactgtaaactctgtgaatgcagttttaatgatcctaatgccaaggagatgcacttgaaa
gggcggcggcacagacttcagtacaagaaaaaagtaaacccagatttacaagtagaagta
aagcccagtattcgagcaagaaaaattcaagaggagaagatgaggaaacagatgcagaaa
gaagaatactggagaaggcgagaagaggaggaacgctggaggatggaaatgaggcggtat
gaagaggacatgtactggaggagaatggaggaagagcaacatcactgggatgaccgtcgc
agaataccagatgggggatatcctcatggccctccaggacctctaggcctgctgggagtt
agacctggaatgcctcctcaaccccaaggaccagctcctctgcgccgccctgactcctct
gatgaccgctatgtgatgaccaagcatgctgctatatatccaactgaggaggaacttcag
gcagtccaaaaaattgtttctattactgagcgtgctttgaaactggtttctgacagcatg
actgatcatgaaaaaagcaagaacaaagagggagatgacaaaaaggatggcagtaaagac
agagctttgaaaggcgttttacgggtgggcgttttggctaaaggtttgctactccgtgga
gaccgaaatgtcaatctagttttgttgtgtgctgagaagccctccaagacgttactcagt
cgtattgctgaaagtctccctaagcaacttgcagtaatcagtccagagaaatacgatatc
aagtgtgcagtcccagaagcagcaataattttaaattcatgtgtggaacccaaaatgcaa
gttacaatcacactgacatctccagtcattcgggaagagaacatgagggatggagatgta
acctcgggtatggtgaaagacccaccggacgtcttggacaggcaaaaatgccttgacgct
ctggctgctctacgccacgctaagtggttccaggctagagctaatggtctgcagtcctgt
gtgattatcatacgtattcttcgtgacctctgtcagcgggttcctacttggtctgatttt
ccaagctgggctatggagttgcttgtggaaaaagcaattagcagcgcaactgggccacag
agtcctggagatgcactgagaagagtttttgagtgtatatcttcaggaatcatccttaaa
ggtggtcctggccttctggacccctgtgaaaaagatccttttgatacgcttgctgtaatg
acagatcagcaacgagaggatattacttcaagtgcacagtttgcgctgagactccttgca
ttccgtcagatacacaaagttctaggaatggatccattaccacagatgaatcaacgcttc
aacatccataataatcgtaaaaggagaagggacagtgatggggttgatgggtttgaagca
gagggaaagaaggacaaaaaagattatgataacttttaa
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integrated database retrieval system
