Aphelocoma coerulescens (scrub jay): 138103316
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Entry
138103316 CDS
T10543
Symbol
LOXHD1
Name
(RefSeq) lipoxygenase homology domain-containing protein 1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Cilium and associated proteins [BR:
acoe03037
]
Other cilia and associated proteins
Stereociliary proteins
138103316 (LOXHD1)
Domain-containing proteins not elsewhere classified [BR:
acoe04990
]
Other domain-containing proteins
Others
138103316 (LOXHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138103316
NCBI-ProteinID:
XP_068857631
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Position
Z
Genome browser
AA seq
2125 aa
AA seq
DB search
MWLGKRLQSAVYEVVTVTGDVRGAGTDANVFVTLFGEHGITPKTHLTSKSSTAFERSKTD
VFRVKTNNVGQIKKIRIEHDNTGLNAGWFLDRVIVTDMNRPHLRFYFPCNNWLSKEDGDG
LYVRDLIGSLNPMDVPKINKYVVRVFTGEVSGSGTDADVFINIFGEKGDTGVRKLDNDKD
NFEKGAEDKFTLDAPNLGKLRKINIGHNNKGGSAGWFLEKVIIEDIGNKCVYQFPVGRWF
ALDEDDGKIQRDILVGGTEATGIVYNVAVVTGDIRGAGTNSKIHVILHGSKGLKNSGKIF
LEGGEFERARTDLFNVEIAALLSPLSRVTIGHDNCGVSSGWFCEKVVVYCPFTGIEQTFP
CGKWLDEDEGDGLIERELYEMVSLRQKRLKKNPWSLWIWTSDIKNAGTDATIFFQIYGDK
GKSDEMKLDNNSDNFETGQTDKFMIELPDLGTFYKLRIWHEKRNPFAGWHLNKVTLLKTL
TKEKYSFNCGRWLDINEEDNEIVRELPAEGSLVTEVMPVIKYRVTVCTGTVSGSGTDANV
FVCLIGDQGDTGERVLYNCINTVNKFEKGNADEFFVEAVTLKQVRRVRIGHDGKGGSSGW
YLAKVIVREEGQPESEAVEFPCYRWLDKNEDDGQIVRELVPAGESPLLKNVSYHISVKTG
DIPGASSDSRVFIKLYGEKADSSKEPLLVSDNDLGNYFERGRVDEFTLDMMDIGKINRIL
IGHDNVGLRSGWFLASVQITVPVQGRQYMFPCNRWLDKDEADGRVEVEVYPSEILPTEKL
INYEVSVVTGDVRAAGTNAKVFMQIYGESGKTELIILENRSNNFERGATDIFKREAADVG
KIYKIRIGHDGTGIGDGWFLESVTLKRLSGKAKESDKKKKKKKKSDEEEEEDTKAEGGMD
VYTFVAHRWLAKDEGDKELVVELVPDGESDLEENTYEVHVLTGTVWGAGTDANVFLSIYG
MERGDTGERQLKRSNNLNKFEKGQVDVFTIKAIDLGELKKLRIRHDNSGSRPSWFLERVE
IIDLKENTTYYFPCQRWLAVEEDDGQIARELVPVDEAFVKKDSENDGQSPATLGLEQKAK
STTYTVKVKTGDKKNAGTDANVFITLYGSKDDTGIVSLKASKINKNKFERGKVDEFTVES
VDIGDLKKIKIGHDNTVVPYEITVYTSDIFGAGTDADVFIVLYGSDGICTQQKSLCLNKR
EQRMYFERNSVNQFIVELEDIGDIIEKIRIGHNGGGLNSGWHLDRVTIRRLLPNGKGSET
VTFPCERWLAKSEDDGETIRELVPSDIFTEKLLKDGTLKQIEEEVEDALEVHTYKISVFT
GDIYGAGTDANVFLNIYGDLGDMGERKLSKSETNFNKFERGQEDTFTIQAVDLGILYKIK
IRHDNSMFSPDWFLEKVEILDETTEESFIFLCERWLSRKKEDKKIERTLYEQSYDGERNS
LDGSSLSMSSQDSNANPKEPRKSSLVKAAEEGSLIPYHITVTTGTEYDSSTDSRVFIIIM
GPQKVQTERLWLDLPEGKDEFADGSVEKFSVWGLDVGEIKKVEVGHDGATPESCWMMEEL
NIIVPTKGVMYNFVCKCWLARDKGDGLTSRILNILDAECVNIGIKILYEVTVVTGDIESG
GTDASIFMTVFGSNGNTEEMLLEKNGDRFERGQEDSFIMEIADIAPLRKMRVRTDGKGTR
PHWFLERITLKNLTNQEVATFTYEDWLSKLKNDKGSLVCEMPAFINDEQMMEDTTYTLQV
KTSDVGGAGTDANVSLILFGEYGDSGTLPLKESNNSNKFERNQMDEFSFSEMLSLGDLCK
VRIWHDNKGIAPGWHLEYIDVMDSALDKTFRFQCDRWLAKGEDDGQLIRELACANNDILE
LKERTAYEIVTVTSDREDADTKENIWIILEGKMGRSKEFLMENSSKKRRFERGATDIFQF
SSKNVGDIAAICVGHCPKDGKKSSAKADVFWHVQEITVTEMELCNKYFFRCNVKIPLRYK
RRDYKVFECAKVTESFASKARSLVPVKYETIVVTGFEKGAGTDAKVFITIYGLNGDSGKR
ALKQKFRNLFERGKTNRFYLETLDMGELKKVRIEHDNSGLAPGWLVERVEITNSATGVTT
IFPCGKWLDENRGDGLICRDLFPTH
NT seq
6378 nt
NT seq
+upstream
nt +downstream
nt
atgtggttggggaaaaggctccagtctgctgtttatgaggtggtgacagtgacaggagat
gtccggggagcaggaacggatgccaacgtctttgtcactctctttggagagcacgggatc
actcccaagactcatctcaccagcaagagcagcacagcctttgagaggagcaaaacagat
gtgttccgagtgaaaaccaataacgttggacaaataaagaaaataaggattgagcatgac
aacactggactgaacgcaggatggttcctcgaccgtgtgatcgtgaccgacatgaacaga
cctcacctccgcttttacttcccctgcaacaactggctgagcaaggaggatggggatggt
ctgtatgtcagagacctcattggcagcctgaaccccatggacgtgcccaaaatcaacaaa
tacgtggtccgggtttttactggtgaagtcagcggcagtggaacagatgcggatgtcttc
attaatatcttcggtgagaaaggagacacaggtgtgaggaaactggacaatgacaaagac
aactttgaaaagggagcagaagacaagttcacgctcgatgctccaaatctgggaaaatta
aggaaaattaatatagggcataataacaagggtggctctgctggctggttccttgaaaag
gtgatcattgaggacattggcaataaatgcgtgtaccaattcccggttggacgctggttc
gctttagatgaagatgacgggaaaatacagagggacattcttgttgggggcactgaagcc
acaggcattgtgtacaacgtggctgtagtgacgggagatatcagaggagctggcaccaac
tccaagatccacgtaatcctccacggctccaaaggcttaaagaacagtgggaagattttc
ttggaaggaggtgaatttgagcgtgccaggacagacctcttcaacgtggagatagctgcc
cttctcagccctctcagtagagtcaccattgggcatgataattgtggtgtcagttctggc
tggttttgtgagaaggtggtggtttactgcccgttcactgggattgagcaaaccttccca
tgtgggaagtggctggatgaagatgaaggggacggtctcattgagcgggaactctatgaa
atggtctccctgcgccagaaaaggctgaaaaaaaacccctggtctctgtggatctggaca
agtgacatcaaaaatgcaggaacagatgccaccatcttcttccagatttatggagacaag
gggaagtcagatgagatgaagctggacaacaattcagacaactttgaaactggacagact
gacaaattcatgatcgagcttcctgatctcggcaccttttataagcttcggatatggcac
gagaaaagaaatccctttgctggctggcatctgaataaggtaactctgctgaaaacgctg
acaaaagaaaaatactcattcaactgcggccgctggctagatataaatgaagaggacaat
gagatcgtgcgggagctccctgccgagggatctctggtgactgaagtcatgccagtgatc
aaataccgcgtgacggtgtgcacgggcacggtgagtggcagtggcacagacgccaacgtc
ttcgtctgcctcatcggcgaccagggggacacaggcgagcgcgtcctctacaactgcatc
aacaccgtcaataaatttgaaaaaggcaacgctgatgaattcttcgttgaagcagtaacg
ctgaagcaggtgaggagggtgaggatagggcatgatggcaaaggaggaagcagtggctgg
taccttgccaaagtgatagtgagggaagaaggacagccagaaagtgaggctgtggaattc
ccctgctacagatggcttgacaaaaatgaggacgatggtcagattgtccgagaattagtg
cctgctggggagtcaccattgctaaaaaatgtcagttatcacatcagcgtgaagacggga
gatatccctggtgccagctcagattccagggttttcatcaaactctatggtgaaaaagca
gactccagcaaagagcctctcttagtctctgataatgatctaggcaattattttgaacgt
ggtcgagtggatgagtttaccctagatatgatggatattggaaagatcaaccgaatactg
attgggcatgataacgtgggtctccggtccggctggttcctggccagtgtccagatcaca
gttccagtccagggaaggcagtacatgttcccctgcaaccgatggcttgacaaggatgag
gctgatggcagggtggaggtggaggtctacccaagtgagattttgcctactgagaaattg
ataaactatgaggtgtctgtagttactggagacgtgcgagccgcaggcaccaatgccaaa
gtcttcatgcagatttatggcgagtctggcaaaacggaattgatcatcttagaaaacaga
tccaacaactttgaaaggggagccacagatatcttcaagagagaggctgcagatgttggc
aagatttataagattcggataggccacgacgggacaggcattggggatggctggttcctg
gaaagcgtcacattgaagcgcctgtctgggaaagcgaaggagtctgacaaaaagaagaag
aagaaaaagaagtctgatgaggaggaagaggaagacaccaaggcagaaggaggaatggat
gtctacacctttgtggcacatcgctggctggctaaggatgaaggggataaggagctcgtg
gtggagctggtgcctgatggagaatctgacctggaggaaaatacctatgaagtccacgtt
ctcactgggactgtgtggggggctgggacggatgctaatgtcttcttgagcatctatggc
atggaaagaggagacacgggtgagcgccagctgaaaaggtcaaataacctcaacaagttt
gagaaaggacaggtagacgtgttcaccatcaaagccattgacctgggagagttgaagaag
ctgcgaatccgccacgataattctggttctaggcccagctggttcctggagagggtggag
attattgacctgaaagagaacaccacgtattattttccatgccagaggtggttggcagtc
gaggaagacgacggtcagattgccagggagctggtcccagtggatgaagcatttgtaaag
aaagattcggaaaatgacggccagtctcctgcaactttgggcctggaacagaaagctaaa
tcaacaacatacacagtgaaagtgaaaactggggacaagaagaatgctgggacggatgcc
aatgtcttcatcacactctatggaagtaaagacgatacagggatagtcagcctaaaggcc
tcaaagattaacaagaacaaatttgagcgtgggaaggtagatgagtttacagtggagtct
gtggatattggagacctgaaaaaaatcaagataggccatgacaatacagttgttccttac
gagatcacggtgtataccagtgatatttttggagctggcacagatgcagatgtcttcatt
gttctttatggaagtgatgggatttgcactcagcaaaaatccctgtgcctcaacaagaga
gagcaaaggatgtattttgaaaggaattcagtgaatcagttcattgtggagctggaggac
attggtgacattattgaaaagattcgcataggtcacaatggtggagggctgaactcaggg
tggcatttggaccgtgtgacgattcggaggctgctgccaaacgggaagggctcggaaact
gtcacatttccatgtgaaagatggcttgcaaagtctgaagacgatggtgagactatcaga
gaactggtgccatctgatatttttactgaaaagctcctgaaggatgggacactcaagcag
atagaggaagaagttgaagatgctttagaagttcacacctacaagatcagcgtgttcact
ggggatatctatggtgctggaactgatgctaatgtcttcctaaatatctatggcgacctg
ggggacatgggagagagaaaactcagtaaatccgaaacaaacttcaacaagtttgaaaga
ggacaggaggacacgttcacaatacaggccgtggaccttggcatcttatacaagatcaag
attcgtcacgacaatagcatgttcagtcctgactggtttctggaaaaagtggagatcctg
gatgaaaccacagaggagtcattcattttcctgtgcgagcgctggctctctagaaagaaa
gaggacaaaaagatagagcgtacactttatgaacagagctatgacggcgagcggaacagc
ctggatggctcctctctcagcatgtccagccaggacagcaatgccaacccgaaggagccc
agaaaatccagcttggtcaaggcggcagaggaaggctcactgatcccgtaccacatcacc
gtcacgacaggcacggagtacgactccagcaccgacagccgcgtgttcatcatcatcatg
ggcccgcagaaagtgcagaccgagaggctgtggctggatctcccagaaggaaaggatgaa
tttgcagatggctctgtggagaaattctcggtttggggcctggatgttggggagatcaaa
aaagtggaggtggggcatgatggtgctacccctgagagctgctggatgatggaagagctc
aacatcatcgtgcccaccaaaggcgtcatgtacaactttgtctgcaagtgctggctggcc
agagacaaaggtgacgggctcacatcacgaattctcaacatcctggatgcagaatgtgtt
aacattggcatcaagatcctctacgaagtcacggttgtgactggagacatcgaaagtggt
ggtaccgatgccagtattttcatgactgtctttggatccaatgggaatactgaggagatg
ctgctggaaaaaaatggagacaggtttgagcggggccaggaggacagtttcattatggag
attgctgacatcgcacccctcaggaagatgagggtccggacggacgggaaggggacgcgc
ccgcactggttcctggaaaggatcaccctgaagaatcttactaatcaagaagtggccaca
tttacctatgaggattggctgtccaagctgaaaaatgacaagggaagcttggtgtgtgag
atgccagctttcataaacgacgagcagatgatggaggacaccacatacactcttcaggtt
aaaaccagtgacgttggaggggcaggcaccgatgccaacgtgtccttgattctgtttggg
gagtatggggacagcggcaccctgcctctgaaggagtccaacaactccaataagtttgag
aggaaccagatggatgaattcagcttctctgaaatgctgagcctgggagacctctgcaaa
gtgcggatctggcacgacaataaaggaattgcaccaggctggcacttggaatatattgat
gtgatggactctgccttggacaagacatttcgcttccagtgtgatcgctggctggctaaa
ggtgaagatgatgggcagctcatcagggaactggcttgtgccaataatgacatcctggaa
ctgaaggaacggactgcctatgagattgtcacagtaaccagcgacagagaggatgcagat
acaaaggaaaacatctggatcatcctagaagggaagatgggccgctcaaaggaattcctt
atggaaaactcctccaagaaaaggagatttgaaaggggagcaacagacatattccagttt
tcttcaaagaacgttggtgatattgcagccatctgtgttggtcactgcccaaaagatggg
aagaagtcctccgcaaaagctgatgtcttctggcatgtccaggagattaccgtgacagag
atggagctctgcaacaagtattttttcaggtgcaacgtgaaaatccctctgcgatacaag
aggcgagactacaaagtcttcgagtgtgccaaggtcaccgagagcttcgccagcaaagcc
cggagcttggtgccagtcaaatacgagaccatcgtggtcacaggcttcgagaagggcgcg
ggcaccgatgccaaagtgttcatcaccatctacggcctgaatggggactcaggaaagcgg
gcgctgaagcagaagttcaggaacctctttgagcgaggcaaaaccaacaggttttacctg
gaaacgctggacatgggggagctgaaaaaggtccggattgagcacgacaacagcggcctg
gctccgggctggctggtggagcgggtggagatcaccaactcggccactggtgtcaccacc
atatttccctgtgggaagtggctggatgaaaacaggggggatgggttaatctgcagggac
ctttttcctactcactga
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