Aphelocoma coerulescens (scrub jay): 138103400
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Entry
138103400 CDS
T10543
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03013
Nucleocytoplasmic transport
acoe03015
mRNA surveillance pathway
acoe03040
Spliceosome
Brite
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
138103400 (NCBP1)
Spliceosome [BR:
acoe03041
]
Common components
Common spliceosomal components
Cap binding complex
138103400 (NCBP1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138103400
NCBI-ProteinID:
XP_068857764
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Position
Z
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AA seq
794 aa
AA seq
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MSRRRHSDDSDGQPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVLEADL
PNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMY
NEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYMFAFLSSLPWVG
KELYEKKDAEMDRLLSQTESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWSQIQKLKK
DRWQERHILRPYLAFDSVLCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGP
VMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAELFQ
LPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHHL
SNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLSPANP
VCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDGEGFTFNP
LKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHPQMI
AVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVLKIHKELEE
TKARLARQHKRRDSDDDDDDDDRSTDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQR
FIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDH
HILAVFQQFCALQA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgacagcgatgggcagccccacaagaggcggaggacg
tccgagccgtcggagatcgaggagaggctcgagtcgctcatctgcagggtgggagagaag
agtaattcatctttggagagcaacctggagggcctagctggtgttttggaagctgatctg
ccaaattacaaaagcaagatactgagaatactatgtactgttgcacgtctgctaccagaa
aagcttactgtttacacgacattggtggggttgctgaatgccaggaactacaattttggc
ggggaatttgtagaagccatgattcgtcagcttaaagaatgtctgaaagtaaatatgtat
aacgaagctgtgcatttagttcgctttctatccgatctcgtgaattgtcatgtaatagct
gcaccttcaatggtagctatgtttgagaactttgtgagtgtgacacaggaggaggatgta
ccccaagtgcgatgtgactggtatatgtttgcatttctgtcatctttgccttgggttgga
aaggagttatatgagaaaaaggatgctgaaatggatcgtctcttgtctcagacagaaagt
tatttgaaacgccgccagaagatccatgtacccatgctgcaagtgtggactgctgataaa
ccacatccacaagaagagtatctagactgcctttggtctcagattcagaaattgaaaaaa
gaccgttggcaagagcggcacatcctgaggccctacttggcttttgacagcgttctctgt
gaggcactgcaacacaatctgccacccttcacacccccacctcacactgaagattctgta
tacccaatgccaagggttatttttaggatgtttgactacacggatgaccctgagggtcct
gtcatgcctggcagccactccgtggaaagatttgtaatagaagagaacctccactgcatc
atcaaatcccactggaaagagagaaagacttgtgctgcacagctgttgagctatccggga
aataacaagatccctttgaactaccatatagtagaggtaatatttgcagagctgtttcaa
ctgccgtctccaccacatattgaagtgatgtacacaacactcctgattgagctgtgcaaa
cttcagcctggctctttaccacaagttcttgcccaagccacagaaatgctctacatgcgt
ttggacacaatgaatacaacatgcgtggacagatttattaactggttttctcaccacttg
agcaactttcagttccgttggagctgggaggactggtcagattgtcttactcaggacctt
gaaaaacccaaacccaaatttgtgagagaggttttggaaaagtgcatgcgactctcctac
catcagcggataatagacattgttcctgcaagtttttctgtcctcagtcctgctaatcca
gtgtgcatttacaaatatggagatgagagtaataggtctcttcctggatataccgtggca
ctctgtttaacaattgcaattaaaaataaggccagcaatgatgaaatcttcagcatttta
aaagatgtgcctaatccaaaccaggatgatgatgatggtgaaggatttactttcaaccca
ctgaaaatagaagtctttgttcagactctgctccatctagctgcaaagtcttttagccac
tccttcagtgccctggcaaagtttcatgaagtcttcaaaacacttgctgaaagtgatgag
gggaaactccatgttctgagggttgtgtatgaggtttggaagaatcatccacagatgatt
gctgtgcttgtggacaagatgattcggacacaaatcgttgactgtgctgcagtagcaaac
tggatcttttcttcagagcttgcacatgattttactaggttttatatctgggagatctta
cattccacaattcgtaagatgaataagcatgtcctgaagattcacaaagaactggaggag
actaaagcaagattggccagacagcacaaaagacgagacagtgatgatgacgatgatgat
gatgaccgaagcaccgatcgggaagatggaccactggaagagcagatagagcgcttgcag
gaaaaagtagagtcagctcagagtgagcaaaagaatctcttccttgttatattccagcgt
ttcattatgttgttaacggagcatttagtgcgctgcgagactggtggaattgatgtattt
acaccttggtacaagagctgtatagagaggttgcagcagatcttcctgcagcaccaccag
ataatccagcagtacatggtgacactagagaacctcctgtttacagctgaactggaccac
cacattctggctgtgtttcagcagttctgtgctctgcaggcctga
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