Aphelocoma coerulescens (scrub jay): 138103473
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Entry
138103473 CDS
T10543
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acoe02000
]
138103473 (TMC1)
03037 Cilium and associated proteins [BR:
acoe03037
]
138103473 (TMC1)
Transporters [BR:
acoe02000
]
Other transporters
Pores ion channels [TC:
1
]
138103473 (TMC1)
Cilium and associated proteins [BR:
acoe03037
]
Other cilia and associated proteins
Stereociliary proteins
138103473 (TMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Piezo_TM1-24
COX16
Motif
Other DBs
NCBI-GeneID:
138103473
NCBI-ProteinID:
XP_068857883
LinkDB
All DBs
Position
Z
Genome browser
AA seq
947 aa
AA seq
DB search
MTKQDKSTEGNDGSDDNEEGSAVENEETVKGTGRKRATPRTRRGRARGRDRHGDEEDEDD
EDGTRRAGHRRHRNRRRGRAAGNEASDSDMEPAKSRKNQENQKSKEDDEEEEDEKGGKSG
KGKNEKKVDKKADKKGKKEKANKKKKDKKKSGSGSDSESEEEPITEEELAKLKEEVEEKK
KLIATLRNKPWKMKKKLSVLKEAQLFVEKFEGALGKGKGKKFYAYKVMMTKKWMKFQRDF
ENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMILFGLTFGLVMVPEALMGKP
YGSLPRKTVPRAEEATAMNFATLWDFSGFAQYSVLFYGYYNNQRTIGWLKFRMPLSYFLV
GVGSIGYSFMIVTRTMAKNANDDGGGDDTSFNFSWKMFTSWDYLIGNPETADNKFASITT
SFKEAIVEEQESRKEENIHLTRFLRVLANFLALCTLAGSGYLIFFVVRRSQQFALEGLEN
YGWWERNEVNTVMSLLGMFCPTLFDVISSLENYHPRIALRWQLGRIFALFLGNLYTFIIA
LMDEINLKLEEEKIVKYNMTIWEASLYNGTIPENSTAPPIQVDPADVPRGPCWETMVGQE
FVRLTVSDMMTTYITILIGDFLRAVFVRFFNYCWCWDLEYGFPSYSEFDISGNVLGLIFN
QGMIWMGSFYAPCLPAINVFRLHTSMYLQCWAVMCCNVPQERVFKASRSNNFYMAMLLFI
LFLSTLPAVYTIVSIPPSFDCGPFSGKTRMYEVISETLEHDFPSWFGKVFGYASNPGLIL
PFILLMVLSLYYLNATSKSYKEANLELKKKLQSQAEENKRRNKQKAQKSNEQEENPFETE
PPQAKPKGDKQDESTPNKDSKKGQDGNESKKTAQPQEVSSSQILQHPGPALNGHYPPQGR
GGNLPPPSIAVTRPPGPRRPGVPGYPPGNPCLPGMQPGMPRGPPMYR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacaggacaagtcaacagaaggaaacgatggaagtgatgacaatgaagaaggc
agtgcagttgagaatgaagaaactgtcaaaggaacagggaggaagagagcgacaccaaga
accagaaggggacgtgccagagggagagataggcatggtgatgaggaggatgaggatgat
gaagacgggacaaggagagctgggcatcgcaggcacagaaaccgtagacgaggacgagca
gctggaaatgaggccagtgattctgatatggaacctgcaaaatccagaaagaaccaggaa
aatcagaaatccaaggaagatgatgaagaagaggaagatgagaaagggggtaaaagtggg
aagggtaaaaatgagaagaaagtggacaaaaaggctgataaaaaagggaaaaaagaaaag
gccaacaagaagaaaaaagacaaaaagaaatcaggatcaggctctgattctgaatctgag
gaggaaccaattacagaggaggaactggccaagctgaaagaagaggtagaagaaaaaaag
aaactcattgccacgctacgaaacaagccatggaagatgaaaaagaagttgtctgtcctt
aaggaagcacagctttttgttgaaaagtttgaaggtgctcttgggaaagggaaaggaaaa
aaattctatgcatacaaagtgatgatgaccaagaaatggatgaaatttcaaagagatttt
gaaaattttaagacagcctgcataccctgggaaatgaaaattaaggagattgaaagtcac
tttggctcatcagtagcatcctatttcatattcttgcgttggatgtatggaataaacatg
attctctttggactgacctttggtctggtaatggtgcctgaggctttgatgggtaagcca
tatggctctttgcctagaaaaactgtcccaagagctgaagaagcaactgctatgaatttt
gctactctctgggattttagtggctttgcacagtattctgtactcttttatggttattat
aataaccagaggacaatcgggtggctcaagttcaggatgcctctttcatatttccttgtt
ggagttgggtctattggctatagctttatgattgtcactcgaacaatggcaaagaatgca
aatgatgatggtggtggggatgacactagttttaacttcagctggaaaatgttcacaagc
tgggactacctgattggcaatcctgagacagcagataataagtttgcctccatcacaaca
agctttaaggaagcaatcgtggaggagcaggagagccgaaaagaagaaaatattcatttg
actcgattcctgagggtacttgctaacttcttagccctatgcacacttgctggaagtggc
tacctcatcttttttgttgtcagaagatcccagcaatttgccttggaaggtctggagaac
tacgggtggtgggaaagaaatgaagtgaacacagttatgtcacttttgggaatgttctgt
ccgactttatttgatgtaatcagttctctggaaaattaccaccctcgaatagctctgaga
tggcagttgggaagaatctttgctctttttcttggcaatctctacactttcattatcgcc
ctaatggatgagatcaacctcaagttggaagaagaaaagatagtcaaatataacatgaca
atatgggaagccagtctgtacaatggcactattccagagaattcaactgctcctccaata
caggtggaccctgctgatgtccccagagggccatgttgggaaacaatggtgggacaggaa
tttgtgcgcctgacagtctctgacatgatgacaacatacatcacaattttaattggtgat
tttttgagagccgtctttgttaggtttttcaattactgctggtgctgggacttggagtat
ggatttccatcatattctgagtttgatataagtggaaatgtgctgggactgatctttaac
caaggcatgatctggatgggatctttttatgctccatgtctcccagcaatcaacgtgttc
cgcctccacacatcgatgtacctgcagtgctgggcagtgatgtgctgcaatgtcccccaa
gaacgggtcttcaaggcttccagatccaataacttctacatggccatgctgcttttcatc
cttttcctctccacactgcctgctgtgtacaccattgtctccatccctccatcttttgac
tgtggtcctttcagtgggaagactagaatgtatgaagtcatatcagaaactctggagcac
gacttcccttcctggtttgggaaggtatttggttatgcctctaaccctggacttatccta
ccttttatattgcttatggtcctgagtctttattatctcaacgcgacatccaaatcctac
aaggaagctaacttggaacttaaaaagaagttacaaagtcaagcagaagaaaataaaaga
agaaataaacaaaaggcacaaaaatcaaatgaacaagaggaaaatccatttgagacagaa
ccaccacaggcaaagcctaaaggagacaagcaagatgaatccactccaaacaaagacagc
aagaaaggacaagatggcaatgaatcaaagaagacagcccagccacaagaagtcagctcc
tctcagatactccagcatcctggccctgccctgaatggccactatcctccacagggccgg
ggaggaaaccttcctccaccatccatagctgtgacaaggccaccagggcccaggaggcct
ggagtgccaggctatccacctggaaatccatgcctcccagggatgcagccaggaatgccc
aggggtcctcccatgtacagataa
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