Aphelocoma coerulescens (scrub jay): 138103517
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Entry
138103517 CDS
T10543
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138103517 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoe03021
]
138103517 (SMARCA2)
03036 Chromosome and associated proteins [BR:
acoe03036
]
138103517 (SMARCA2)
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138103517 (SMARCA2)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
138103517 (SMARCA2)
Chromatin remodeling factors
BAF complex
138103517 (SMARCA2)
PBAF complex
138103517 (SMARCA2)
GBAF(ncBAF) complex
138103517 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
138103517
NCBI-ProteinID:
XP_068857951
LinkDB
All DBs
Position
Z
Genome browser
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSVDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIAGDPQVMNQPNRGPSPFSPAQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHAMSGAATGP
GPAPGMPGHTAAITPKTWTEGQAPDMNVSNAQQKLPAPAPSGRPSPAPPANQPAATLPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDEEEESSRLEADEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEEE
DEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggcgccatgcctcatcctggtccttcccctggaccagga
ccctcacctggaccgattctgggacctagcccaggaccagggccatctcctggctccgtt
cacagcatgatggggccaagtcctggtccgcccagtgtcccacatccaatgccgacaatg
gggcctacagattatccacaggaaggcatgcatcaaatgcataagtctgtcgatggcttg
catgaaaaaggaatggttgaagatgttcattgtggctccatgaagagtatgagacctcct
catcctggaatgggtccacctcagagtccaatggaccagcatagccaaggttatatgtct
ccacacccatctccactaggagcaccagagcacgtgtccagtccaatgtctggaggaggt
ccaacaccacctcagatgactccgagtcagccaggacccattatagcaggagacccacaa
gttatgaatcagcctaacagagggccttcccccttcagccctgcacagctgcatcagctg
cgggctcagattctagcatacaaaatgctggcgaggggtcagcccttacccgaaaacctc
cagcttgctgtgcagggcaagagaaccctgccgggcattcaacagcagcagcctcccagt
gccttcaacagacagtccggtattgggttacatgcaatgagtggtgctgcaactggacca
gggcctgctccggggatgcctggacatacagctgccattacccctaaaacttggactgaa
ggccaagccccagatatgaacgtctccaatgcacaacaaaagcttccagcaccagctcct
agtgggaggccatctcctgctccccctgccaaccagcctgctgccaccctgcctgggccc
tctgtaccacagcccccacctggacagccttcacccattgtccagctgcagcaaaagcag
aaccgcatcagccctatccagaagccacaaggattggatcctgttgaaatactccaagaa
cgtgaatataggcttcaggctcgaattgctcacagaatccaggaactggagaacttgcct
ggttctctgccccctgatctacgaaccaaagctacagtggagttgaaggcacttaggtta
ctgaatttccagcgccagctaagacaagaggtagtagcctgcatgcgtcgtgacacaaca
ctggagacagcactgaactctaaagcctacaaacgaagcaagcgccagactttgagagag
gctcgtatgacagaaaagcttgagaaacagcagaagatagaacaggagaggaagcgtagg
cagaagcaccaggaatacctgaatagcatattgcagcatgctaaagattttaaagagtac
caccggtcagtcgctgggaaaattcagaaactttctaaagccgtggcaacttggcatgcc
aacactgaacgtgagcagaaaaaagaaactgagagaattgagaaagaaagaatgaggaga
ctaatggcggaagatgaagaaggctaccgtaagctgattgatcaaaagaaagacagacgc
ctagcctacctgttgcagcaaacggatgagtacgtggctaacttgactaacctggtatgg
gagcataagcaagcacaagcagccaaagagaagaagaagcgaaggagaagaaagaagaaa
gctgaagaaaatgcagaaggaatggcatctggtcttggccccgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
cttcttggaccagaagcacccaaagcaagtcagctggatgcttggctggaaatgaaccct
ggctatgaagttgctcccagatcagacagtgaagatgaaagtggctctgaatatgaggag
gaggatgaggaagaagaatcaagcagactagaagcagatgagaagatacttctggatcct
aacagcgaggaagtttctgagaaggatgcaaagcaaataattgagactgccaaacaagat
gtggatgatgaatatagcatgcagtatagtgctagagggtctcagtcctactacactgtt
gctcatgcaatcacagaaagggtggaaaagcagtcttcccttcttattaatggcacatta
aaacattatcagctccagggactggaatggatggtttctctctataataacaatctgaat
ggaattttagcagatgaaatgggactaggaaagacaatacagactattgctctcatcact
tacctgatggagcacaaaagactcaatggcccctatctcatcattgttcccttgtcgact
ttatccaattggacatacgaatttgacaaatgggctccttctgtggtgaagatatcttac
aagggtacacctgcaatgcgccgctcacttgttcctcagcttagaagtggaaaatttaat
gttcttttaactacttacgagtacataataaaggacaaacatatccttgctaagattcgg
tggaagtacatgatagtagatgagggccatcgaatgaagaaccatcactgcaagctgact
caggtcttgaatactcactatgtggcccctcggcggatcctgctgactgggactcctttg
cagaacaaattgcctgaactttgggctcttctcaatttccttcttccaaccattttcaag
agctgcagcacctttgaacagtggttcaacgctccatttgccatgactggagaaagggtg
gacttaaatgaggaagaaactattctgatcatccgtcgtctccataaagtgcttcggccc
ttcttgctgagaagattgaagaaagaggttgagtctcaactcccagaaaaggtggaatat
gtgatcaaatgtgatatgtcagctcttcaaaagatcctgtaccgtcacatgcaagccaag
ggaatccttctcacagatggttctgaaaaagacaagaagggaaaaggtggagcaaaaact
cttatgaacactatcatgcaattgagaaagatatgcaatcacccatacatgtttcaacac
attgaggagtccttcgctgaacatctgggctactcaaatggtgtcattaatggagctgaa
ctttatcgggcctcagggaagtttgagctactcgatcgtattctaccaaagttacgagct
actaaccatcgtgtgcttcttttctgtcaaatgacatcactcatgaccattatggaagac
tactttgcatttcgaaatttcctttacctgcgtcttgatggcacaacaaaatcagaggat
cgagctgctctgttgaagaagttcaatgaacctggatcacagtactttatcttcttactg
agtacaagggctggagggctaggcttaaatctccaggctgctgacactgttattatcttt
gacagtgactggaaccctcatcaggacttgcaggcccaggatagagctcaccgaattggt
cagcagaatgaagttagagtcctgcgactgtgcactgtgaacagtgtggaagagaagata
cttgctgcagcaaagtataagctgaatgtagatcaaaaagttattcaggctggaatgttt
gatcagaaatcttcaagccatgaacggagagcattcctacaagctatattggagcacgaa
gaagaaaatgaggaagaagatgaagttcctgatgatgagactctgaatcagatgattgct
cgacgtgaggaggagtttgatctctttatgcgcatggacatggatcgtcgcagggaggat
gccagaaaccctaaacgtaaaccccgcctgatggaggaggatgaattgccatcctggatt
attaaggatgatgctgaagttgaaaggcttacatgtgaagaagaggaagagaaaatattt
ggaagaggatcccgtcaacgcagggatgtggactacagtgatgctctcacagagaaacag
tggctgcgggcaattgaagacggcaatttggaagaaatggaggaggaagtccggcttaaa
aagcgaaagagacgaagaaacgtggataaagattctgggaaggaggatggagagaaagca
aagaaaagaagaggcagaccccctgcagagaagttgtcgcccaatccacccaaactgact
aaacaaatgaatgctatcattgatactgtgataaactacaaggatagttcaggacggcag
ctaagtgaagtcttcattcagctcccatctaggaaagaactaccagagtattacgaattg
ataaggaaaccagtggacttcaaaaaaataaaggaaagaattcgcaaccataaatatcgg
agtcttggggatttggagaaagatgtcatgttgctgtgtcacaatgctcagacattcaac
ttggagggatctcagatctatgaggattccattgttcttcagtctgtgttcaaaagtgca
cgacagaagatagccaaagaagaagaaagcgaggatgaaagcaatgatgatgaagaagaa
gatgaagaagaagagtcggaatcagaatcgaaatcagtgaaagtcaaaatcaagttaaat
aagaaggatgaaaaaagtcgggagaaaggaaaaggcaagaagaggcaaagcagagcaaaa
gccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
