Aphelocoma coerulescens (scrub jay): 138103557
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Entry
138103557 CDS
T10543
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138103557 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
acoe03310
]
138103557 (RORB)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
138103557 (RORB)
Nuclear receptors [BR:
acoe03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
138103557 (RORB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
OmpH
Motif
Other DBs
NCBI-GeneID:
138103557
NCBI-ProteinID:
XP_068858032
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Position
Z
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AA seq
459 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQQQQQSGEAEALAR
VYSSSISNGLNNLNNETGSTYSNGHVIDLPKSEGYYNVDSAQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGISMSEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKVYQSKTREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDEETLTKLIAKIPTITALC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDSTTGCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggtgataaatcctctggaata
cactatggagtcatcacatgtgaaggctgcaagggattctttcggaggagtcagcagaac
aatgcatcctactcctgtccaagacagagaaactgtttaattgacagaaccaacagaaat
cgttgccaacactgccgactgcagaaatgtcttgccctgggaatgtctcgagatgctgtg
aaatttggaagaatgtccaaaaagcagagggatagcttgtacgctgaagtgcagaagcac
cagcaacgactgcaggagcagcagcagcagcagagtggtgaggcagaagcccttgccagg
gtttacagcagcagcatcagcaatggcttgaacaatctgaataacgaaactggcagcacc
tactcaaacgggcacgtcatcgatctgccgaagtctgagggttattataatgtggattct
gcccagccctccccagaccagtctgggttagacatgactggaatcaaacagataaagcag
gaacctatctatgacctcacctctgtaccaaacttgtttacctatagctctttcaacaac
ggccaattagctccagggatatccatgagtgaaatagatcgaattgcacagaatatcatt
aaatctcatttggagacatgtcagtatacaatggaggaattacatcagctagcatggcag
acccacacatacgaagaaataaaggtttaccagagcaagacgagagaagctctgtggcag
cagtgtgctattcagatcacccatgctatccagtatgtggtggagtttgcaaagcgcata
acaggcttcatggagctctgccagaatgaccaaattctccttcttaagtcaggctgcttg
gaagtggttttggtgagaatgtgccgtgccttcaacccacttaacaatactgttctgttt
gaaggaaagtatggagggatgcaaatgtttaaagctttgggttctgatgatctggtaaat
gaagcatttgactttgcaaagaatttatgttccttacagctgactgaggaggagattgcc
ttgttttcatctgctgttctgatttcaccagatcgagcctggttaatagagccaaggaag
gtccagaagcttcaggagaagatttactttgcacttcaacatgttatccagaagaaccac
ctcgacgaggagacattgacaaaattaatagccaagataccaacaattactgcactttgc
aacttgcacggagagaaactgcaggtatttaagcagtctcatccagacatagtgaacaca
ctgtttcctccattatacaaggagcttttcaatccagactcaaccactggctgcaagtga
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