Aphelocoma coerulescens (scrub jay): 138103606
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Entry
138103606 CDS
T10543
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7 isoform X1
KO
K12597
protein AIR1/2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138103606 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138103606 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
acoe03016
]
138103606 (ZCCHC7)
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
138103606 (ZCCHC7)
Transfer RNA biogenesis [BR:
acoe03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
138103606 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
zf-CCHC_3
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
138103606
NCBI-ProteinID:
XP_068858125
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Position
Z
Genome browser
AA seq
573 aa
AA seq
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MFTGYDGPENTEVYEDELYPEESSSEQSVDSEVEFHLYSQIHYSQDLGEISTLEMDEEAG
VAEVMGHSSCLTEKQDEDEKLPEFTSGGTQLSNEPEIIVLSDTPEEDSIYKSKSKRSRCS
SAQGKTHIQMVSSTPNHTKAAGCNALCPPESDVGTPRQRNSTSGRPTPVCSAGPQAMHDV
LVIDNSSEEESLISDSDNVESWMLLGAGADDRDEDIMLNLEGCATPVSEGEIDVDWTISH
KDLEARISNYAGMRHSSMRYYKNVTCRNCDRPGHLSKNCPTPKKVPPCCLCAGRDHLQHS
CPARFCLNCCLPGHYFRECLERAYWNKHCNRCDMKGHYADACPEIWRQYHLTTKPGPIKA
AGSHSERSAAVYCYNCSRKGHFGYECSEKRMQGNMFPSSPFIYYYDDECDIKRRANRLKR
KVADLQEAGLLPEQSETPLQEEQPEVHSHKKKSKLWKEQHGKNSKNSEQQKKMKVSRAKK
PQEEKHRRGVEIRCEPKEDFPRGYKQQVCKGSRVRHKSLFQAFSGSKATCVQQPLEGAKR
KKKWKKQKNASPDSRDNLFLIKQRKKKSKQKSW
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccgggtatgatggtcctgagaatactgaagtatatgaagatgagctttatccc
gaggagtcatccagtgagcagagtgttgatagtgaggtggagtttcatctctatagccag
atccactattcccaggatcttggagaaatcagtacactggaaatggatgaagaagctggt
gttgcagaagtcatgggtcatagttcatgtctaactgagaaacaggatgaagatgagaag
ctccctgaattcaccagtggtggtactcagctttcaaatgagcccgagatcatcgtcctg
tctgatacaccagaggaagacagcatctacaaaagcaagtcaaagaggtcaagatgctct
tcagctcaaggtaaaacacacatccagatggtatcctccacaccaaatcacaccaaagct
gctggatgtaatgccctgtgtccccctgaatcagatgtgggcacaccaaggcagagaaac
agcactagtgggaggcctacccctgtctgttctgctggacctcaagccatgcatgatgtg
ttggtaatagacaacagctcggaggaggagagcttgatctctgacagtgataacgttgaa
agctggatgcttttgggagctggtgctgatgacagggatgaagacatcatgttgaacctt
gagggctgtgccactcctgtcagcgaaggagaaattgatgtggactggaccatctctcat
aaagacttagaggcacggatctccaactacgcgggtatgaggcacagcagcatgcggtac
tacaaaaacgttacttgtaggaactgcgacagaccaggacatttgtccaagaactgtccc
actccaaagaaagttcccccttgttgcctgtgtgcaggaagagaccatctacagcacagc
tgcccggcacgtttctgtctgaactgctgtttgcctgggcactatttcagggaatgccta
gagagagcctattggaacaaacactgcaaccgctgcgacatgaagggccactatgctgat
gcttgcccagaaatatggaggcagtatcacctaacaacaaagccaggacccatcaaggca
gctggttcgcactcggagcgctctgcggccgtgtactgctacaactgttcccgcaaagga
cacttcggatacgagtgctcagagaagcggatgcagggaaacatgttccccagctctccc
ttcatctactactacgatgatgaatgcgatatcaagaggagagcaaacaggttaaaaagg
aaggtggcagacctgcaggaagctggccttctgccggaacagtctgaaacaccattgcag
gaagaacagcctgaggtgcacagccacaagaaaaagagcaaactttggaaagaacaacat
gggaagaacagcaagaacagtgaacagcaaaagaagatgaaggtgtcccgggcaaagaaa
ccccaagaggagaagcacaggaggggtgttgaaatccgctgcgaaccaaaggaggacttc
cctcgggggtacaagcagcaggtgtgcaagggcagcagggtccgccacaagtcccttttc
caggcattctcaggcagcaaagccacatgtgtgcagcagcctctggaaggtgccaaaagg
aagaagaaatggaaaaagcagaaaaatgctagtcctgacagcagggacaatctattcctt
ataaaacagcggaaaaagaagtccaaacagaagtcctggtga
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