Aphelocoma coerulescens (scrub jay): 138103641
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Entry
138103641 CDS
T10543
Symbol
IFT56
Name
(RefSeq) intraflagellar transport protein 56 isoform X1
KO
K19685
intraflagellar transport protein 56
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
acoe03037
]
138103641 (IFT56)
Cilium and associated proteins [BR:
acoe03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
138103641 (IFT56)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_19
ANAPC3
TPR_16
TPR_14
TPR_17
TPR_8
TPR_2
TPR_9
TPR_6
Coatomer_E
TPR_1
Motif
Other DBs
NCBI-GeneID:
138103641
NCBI-ProteinID:
XP_068858201
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All DBs
Position
1A:51835178..51890521
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AA seq
554 aa
AA seq
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MMLSRAKPAVGGTPPAGDRRKKKGKEVPQLEELLAQRDFTGAIALLEFKQHVGEEEEDGN
LWIGYCAFHLGDYKRALEEYEALTKQPTCSPDVWVNLACTYFFLGMYTQAEQAALKAPKS
GLQNRLLFHLAHKFSDEKKLMSSHQNLQDVTEDQLSLASIHYMRSHYQEAIDIYKRILLD
NREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQVPDSTIALNLKACNHFRLFNGKAAEA
ELKNLTDSASSSFEFGKELIKHNLVVFRGGEGALQVLPPLVDVIPEARLNLVIYYLQQDD
VQEAYNLIKDLEPTAPQEYILKGVVNAALGQEMGSRDHLKIAQQFFQLVGESASECDTIP
GRQCMSSCFFLLRQFPNVLIYLNSIKSYFYNNDTFNFNYAQAKAAMGNFSEAEEVFLLIQ
SEKIKSDFVYLSWLARCYIMNKKPQLAWKLYLKMETSGDSFNLLQLIANDCYKMRQFYYS
AKAFDILERLDNNPEYWEGKRGACVGVFQMILAGREAKDTLREVLDLLKSTGNSQVEYIV
RIMKKWAKENRVPV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgatgctctcccgggccaagccggccgtggggggtaccccgccggcgggagacaggcgg
aaaaagaaagggaaggaggtgccacagctggaggaactcttggcccagagggacttcacc
ggcgcgatcgccttgctggagtttaaacagcacgtgggtgaggaggaggaggatggcaac
ctttggatcggatactgtgcgtttcatttgggtgactacaagagagctctggaggaatat
gaggccttaaccaagcaaccaacttgcagtccagatgtttgggtgaaccttgcttgtacg
tacttctttctggggatgtacacgcaagcagaacaagcggctttgaaagcacctaagagt
ggtctccagaaccgtttactctttcacctggcacataagttcagtgatgaaaagaaactg
atgagctctcaccagaatctgcaagatgttacagaagatcagcttagcctggcatcgatc
cactacatgcggtcccactaccaagaagctattgatatctacaagcgcattctgctggat
aatcgggaatacctggctctgaatgtatatgtggccctgtgctattacaaactggattac
tatgatgtatcccaggaagtgctagctgtttatcttcagcaagttcctgacagcaccatt
gctcttaaccttaaggcttgtaaccatttccgacttttcaatgggaaagctgcggaggca
gagctcaagaacttgacagacagtgcctcatcatcttttgagtttggcaaggaactcatt
aagcacaatctggtggttttccgaggaggagaaggggctttgcaggtcctacctcctctg
gttgatgttattcctgaggcaagactgaatcttgttatttactatctccagcaagatgat
gtgcaggaggcttataacctgattaaggacctggaacctacagctccacaggagtacatc
ctcaaaggggtggtaaatgcagcacttggacaagaaatgggctcgagagaccatctgaaa
attgctcaacagttcttccagttggtaggggaatcagccagtgaatgtgataccattcca
gggagacagtgcatgtcctcctgcttctttcttcttagacaatttcctaatgtcctaatt
tacctcaactcaatcaagagttacttctacaacaatgacacttttaacttcaactatgcc
caagccaaagctgcaatgggcaattttagtgaagctgaagaggtgttccttttgatccag
agtgagaagataaaaagtgattttgtttaccttagctggctggctcgctgctatattatg
aataagaaaccacagctggcctggaagctctatctgaagatggagacctcaggggactcc
tttaaccttttgcagctcattgcgaatgattgttacaaaatgcgtcagttttactattcg
gccaaagcgtttgatattctggagagactggacaataatcctgaatactgggaaggcaag
agaggtgcttgtgtgggtgtatttcaaatgatcctagctggccgagaagcaaaagatact
ctacgggaagtactggaccttctgaagagcactggtaattctcaagtagaatacattgtt
cgcatcatgaaaaagtgggccaaggagaacagagtccctgtttaa
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