KEGG   Aphelocoma coerulescens (scrub jay): 138103815
Entry
138103815         CDS       T10543                                 
Symbol
POLR1E
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    138103815 (POLR1E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acoe03021]
    138103815 (POLR1E)
Transcription machinery [BR:acoe03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     138103815 (POLR1E)
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 138103815
NCBI-ProteinID: XP_068858505
LinkDB
Position
Z:complement(71880779..71888793)
AA seq 414 aa
MAAAATWCYRGDPEAERPAALVRFANGKLQHPDSLRFTVYRNRDTAHPRKRHRRILVSET
ERLCYVGHNFGNEVMKCNSLCRYFVGVLDKNSGQMEVYNAEIFNMQPLLSDNLIPDDTRD
YQNKSYREKMDLCIEAFGTSKQKRALSSRRMNAVGSDIVSTAVTKAAANVIDAKGVTALM
QDMAQDDVQNISAFLPPCHEDADRPEHIYKFEDILSPAEYEALRVPAAALASASAEEMAK
RVEERSHCSFVLEELKFLPTDERSRDHKARCLWFLDTLIRFSHLKVIKKKHPMGPECPHI
ISRKLMKNFTSLTYNNGSIQNFISASMKAKLTAYVIVLALHINNFQTDLTVLQNDMKLPE
SRILDIAKALRLRVSKAKGGPGLESDQNHKLGTLSLPLPMQKAPEGQRKRKKMN
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggctgccgccgccacctggtgctaccgcggggaccccgaggcggagcgaccggcggcg
ctcgtgcggttcgcgaacgggaagctgcagcaccccgactccctgcgcttcaccgtgtac
cggaaccgggacacggcgcatccccggaaaaggcaccgcaggatcctggtctcagagaca
gagcggctctgctatgtgggacacaacttcggcaacgaggtcatgaagtgcaactccctg
tgcaggtactttgttggtgtgttagacaagaactctgggcagatggaggtctacaatgcc
gaaatattcaacatgcagcccctgctctcagataacttgatacctgacgacacaagggat
taccagaacaaatcctacagggagaagatggatttgtgcattgaggcctttggaaccagc
aagcagaagcgagcactgagctctcgccgcatgaacgccgtgggcagcgacatcgtgagc
acagctgtgacaaaagcagcagcaaatgttatcgatgcaaagggagtgacagctctgatg
caggacatggcccaggacgacgtgcagaacatctctgccttcctcccaccatgccacgag
gatgctgacaggccggagcacatttacaagtttgaggacatcctgtctcctgccgagtat
gaggcgctgcgggtgccggcagccgccctcgccagcgccagcgcagaggagatggccaag
agggtggaagagaggagccattgctccttcgttttggaggagctgaagttcctgcccact
gatgagaggagtagagaccacaaagcccgatgcctctggttcctggacaccctcatcagg
ttcagtcacctgaaagtgatcaagaagaagcatccaatgggtcctgaatgcccacacatc
atcagcaggaaactcatgaagaatttcacctcgctgacctacaacaatggcagcatccag
aatttcatctctgcatccatgaaggctaaactcaccgcgtacgtcattgtcttggctttg
cacatcaacaacttccagactgacctcaccgtcctgcagaacgacatgaagctcccagag
agcaggatactggacatcgccaaggccctgcggctgagggtgtccaaggccaaggggggg
ccggggctagagagtgaccagaaccacaagctgggcactctgtctctgcccttgcccatg
cagaaggcaccagagggacagcggaagcgcaagaaaatgaactga

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