Aphelocoma coerulescens (scrub jay): 138103897
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Entry
138103897 CDS
T10543
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03410
Base excision repair
Brite
Enzymes [BR:
acoe01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
138103897 (APTX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
138103897 (APTX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
138103897 (APTX)
DNA repair and recombination proteins [BR:
acoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
138103897 (APTX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
138103897 (APTX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138103897
NCBI-ProteinID:
XP_068858619
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Position
Z
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AA seq
321 aa
AA seq
DB search
MSQLSRIVVFQENGAEVGDSTYTIIFYCFSFFCLPKIGVNPTSVDLVNIGKDEVVKMKPG
QVLHIVNNLYPYTVQFAEESGKTVPQADKTPHEDSCENDDTELVPRKTMKLEMVDTQGSS
TNPKLSNTSVSTHEGTSRKQEHLGHWSQGLKSSMQDPKMQVYKDEKTVVIKDKYPKARFH
WLILPWDPISSLKSVTRDHLELLEHMHAVGQKMIEQCPARESLEFRLGYHAIPSMSQLHL
HVISQDFDSPALKTKKHWNSFTTDYFLNSQDVIEMVRSKGKVMVKDGTSELLKLPLRCHC
CKQQLSTIPQLKEHLRKHWPK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagttaagcaggatagtggtattccaggagaatggagcagaagttggtgattcc
acttacaccatcattttctactgtttttccttcttctgtctaccaaagataggggtcaac
ccaactagtgttgatcttgtgaatattggcaaggatgaagtggtgaaaatgaaaccaggc
caagttctgcatattgtgaataatctttacccctacacggtgcaatttgctgaagagtct
gggaaaactgttccacaagcagacaagacgccacatgaggactcctgtgagaatgatgat
acagagcttgtgcccagaaaaacaatgaaattggagatggtggatacacaaggcagttct
acaaatcccaagctaagcaataccagtgtatctacacatgaaggaacttcgagaaagcag
gaacatttaggacactggagtcagggtctaaagagctccatgcaagatccaaaaatgcag
gtttacaaagatgaaaagactgtagtcatcaaggataaatatcccaaagcacgtttccac
tggcttatcttaccatgggaccccatttcaagcctgaagtcagtcaccagggaccacctt
gaactcctggaacatatgcatgcagttgggcaaaaaatgattgagcagtgccctgccaga
gagagcctggagttcagactgggctaccatgctattcccagtatgagtcagctacatttg
catgtaatcagccaggattttgattctccggccctgaaaaccaaaaagcactggaactct
tttactacagactacttcttaaactctcaagatgtgatagagatggtaagaagcaaggga
aaagtgatggtgaaagacggtacctctgaacttctcaaacttcccctcagatgccattgt
tgtaaacaacagctgtccacaatcccacagttaaaggaacatcttaggaaacactggcca
aaatga
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