KEGG   Aphelocoma coerulescens (scrub jay): 138103897
Entry
138103897         CDS       T10543                                 
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03410  Base excision repair
Brite
Enzymes [BR:acoe01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     138103897 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     138103897 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     138103897 (APTX)
DNA repair and recombination proteins [BR:acoe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     138103897 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     138103897 (APTX)
SSDB
Other DBs
NCBI-GeneID: 138103897
NCBI-ProteinID: XP_068858619
LinkDB
Position
Z
AA seq 321 aa
MSQLSRIVVFQENGAEVGDSTYTIIFYCFSFFCLPKIGVNPTSVDLVNIGKDEVVKMKPG
QVLHIVNNLYPYTVQFAEESGKTVPQADKTPHEDSCENDDTELVPRKTMKLEMVDTQGSS
TNPKLSNTSVSTHEGTSRKQEHLGHWSQGLKSSMQDPKMQVYKDEKTVVIKDKYPKARFH
WLILPWDPISSLKSVTRDHLELLEHMHAVGQKMIEQCPARESLEFRLGYHAIPSMSQLHL
HVISQDFDSPALKTKKHWNSFTTDYFLNSQDVIEMVRSKGKVMVKDGTSELLKLPLRCHC
CKQQLSTIPQLKEHLRKHWPK
NT seq 966 nt   +upstreamnt  +downstreamnt
atgtcacagttaagcaggatagtggtattccaggagaatggagcagaagttggtgattcc
acttacaccatcattttctactgtttttccttcttctgtctaccaaagataggggtcaac
ccaactagtgttgatcttgtgaatattggcaaggatgaagtggtgaaaatgaaaccaggc
caagttctgcatattgtgaataatctttacccctacacggtgcaatttgctgaagagtct
gggaaaactgttccacaagcagacaagacgccacatgaggactcctgtgagaatgatgat
acagagcttgtgcccagaaaaacaatgaaattggagatggtggatacacaaggcagttct
acaaatcccaagctaagcaataccagtgtatctacacatgaaggaacttcgagaaagcag
gaacatttaggacactggagtcagggtctaaagagctccatgcaagatccaaaaatgcag
gtttacaaagatgaaaagactgtagtcatcaaggataaatatcccaaagcacgtttccac
tggcttatcttaccatgggaccccatttcaagcctgaagtcagtcaccagggaccacctt
gaactcctggaacatatgcatgcagttgggcaaaaaatgattgagcagtgccctgccaga
gagagcctggagttcagactgggctaccatgctattcccagtatgagtcagctacatttg
catgtaatcagccaggattttgattctccggccctgaaaaccaaaaagcactggaactct
tttactacagactacttcttaaactctcaagatgtgatagagatggtaagaagcaaggga
aaagtgatggtgaaagacggtacctctgaacttctcaaacttcccctcagatgccattgt
tgtaaacaacagctgtccacaatcccacagttaaaggaacatcttaggaaacactggcca
aaatga

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