Aphelocoma coerulescens (scrub jay): 138103917
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Entry
138103917 CDS
T10543
Symbol
FANCC
Name
(RefSeq) Fanconi anemia group C protein isoform X1
KO
K10890
fanconi anemia group C protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
138103917 (FANCC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acoe03400
]
138103917 (FANCC)
DNA repair and recombination proteins [BR:
acoe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
138103917 (FANCC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
DUF6542
EF-hand_2
Motif
Other DBs
NCBI-GeneID:
138103917
NCBI-ProteinID:
XP_068858663
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Position
Z
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AA seq
560 aa
AA seq
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MDQDTTVPKLNFGYWLDKAIEWGQATTLESQKDVCLHLPQLQEFLCQLYETIKHSQSSTV
AIQQFPLIGQLLGRLCWNPFVIGYDESQKTLMWCLCCLYSSEPQSTVELKANSWIRSLLC
HLLSSSKWESNEAETSTFVSALGYTSEDYYCHLVKNMVVSLVTELRENQFNGLNIQGSIS
ASRVNAVSIFCVPLITLPDLTPLLETLLLYHGGSSKEILSSEFLEAVNEAFLKKKISLPE
SAVFSLWLRHLPSLEKATLHLLDQLFSIQLNSLEEVACVMKDSLLPQAATHPAIFRIVNE
IFKNALMETDGTSGVMTTIQVFTQLFLQAHQNENKQHKFPLKAYFPYHHQPLVRGLVRRP
SELPTSYWSQHLKHISDMLKTLVEDTNISSLTDLFEIWFLVACFGEWLDIAAEQLLKAAV
EPDAVLWLLAFYYCPKNENQQRTQTMVEAQAVYSHLMKLFSCTDLSLKDLEGAVHRITGI
EQCWNQCLTTHLLTNFLLFSHGGHKIAQECIYHITKTADTSKEVYNLLIRTAYRFNHSGE
ENQRTVKLLNELLQKLTLKV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggacactacagtgcccaaactgaactttgggtattggttggataaagctatt
gaatggggtcaagccactacgctggaatcccagaaagatgtgtgccttcacttgccccag
ctccaggaatttctatgtcagctttatgaaacaataaaacattcgcagagttcaactgta
gcaatccagcagttccctttaattggacagcttctaggaaggctctgttggaatcctttt
gttataggatatgatgaaagccagaaaactctgatgtggtgcttatgttgtctgtacagc
agtgaaccacagagcactgtggaactgaaggccaacagctggatacgcagtttgctgtgc
catctcctttcttcttctaagtgggaaagtaacgaagctgaaactagtacattcgtatca
gctctgggctacacgtcagaagattattattgtcacttggttaaaaatatggtcgtttca
ttagtaacagaactcagagaaaaccagttcaatggacttaacattcaggggagcatttca
gctagtcgtgtgaatgctgtgtccattttctgtgtgcctctcattactttgcctgaccta
actccattgctggaaactctccttctttaccacggaggttcatcaaaagaaattctcagt
tcagagtttcttgaggctgtgaatgaggcctttttaaagaagaagatctcccttcctgaa
tcagctgtcttcagcctttggcttcgtcacttaccaagccttgaaaaagctaccttacat
cttttagaccagttgttttccattcagttgaattcactggaagaagtggcttgtgtcatg
aaagactcgttgctgccacaagcagcaacccatcctgccattttcagaattgtaaatgaa
attttcaagaatgcactgatggaaacggatggaacttcaggagttatgacaacaatacag
gtgtttacacagctcttccttcaggctcatcagaatgaaaacaaacagcataaatttccg
ctgaaggcctacttcccgtaccatcaccagccccttgtaagaggcttagtcagacgtcct
tctgaactcccaacttcatattggtctcaacacttgaaacacatttcggatatgctcaaa
acgttagtagaagatacaaacattagttctctcactgacctttttgaaatctggtttttg
gttgcttgttttggagaatggctggatattgcagcagaacaattactgaaggctgctgta
gaaccagatgctgtgctgtggctgctggcattttactactgtcctaagaatgaaaatcaa
caaagaactcaaacaatggtagaagctcaagcagtctacagtcatctaatgaagctcttc
agctgtacagacctttctctcaaagacctggagggtgctgtacataggataacaggtata
gagcagtgttggaaccagtgtcttacaacacatcttctgaccaactttttgctcttttcg
catggtggacataagattgcccaggaatgtatttaccatattactaagacagctgataca
agcaaagaagtttataaccttcttatccgtactgcatacagatttaaccatagtggagaa
gaaaaccaaaggactgtgaagctgctgaatgaacttcttcaaaaacttacattgaaagtt
tag
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