Aphelocoma coerulescens (scrub jay): 138104061
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Entry
138104061 CDS
T10543
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03013
Nucleocytoplasmic transport
acoe05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138104061 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
138104061 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138104061 (NUP98)
03036 Chromosome and associated proteins [BR:
acoe03036
]
138104061 (NUP98)
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138104061 (NUP98)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
138104061 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
ZapB
Motif
Other DBs
NCBI-GeneID:
138104061
NCBI-ProteinID:
XP_068858960
LinkDB
All DBs
Position
1:complement(527048..561764)
Genome browser
AA seq
1795 aa
AA seq
DB search
MFNKSFGAPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNSNTGGLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGGLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FSFGGTSTLGQPNTSTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQANTGFGV
GGSTLFGNKPAGFGATTTSAPSFGTTTGGGLFGFGANTAGNSLFGNKPATGTLGTGLGTG
FGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAA
QQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQSAGSAKSQLFDGLDDDEPSLSNGAFMPKKSIKKLVLKNLSSSNLFSPVSR
ENEDLASPSEYPENGDRFFLSVPPEENHRQDGEQEEEEEAHEVTRFYTNPIAKPIPQTLE
GSGHKPHSSVDDTIVALNMRAALRNGLEGSSEDASFQEDSLQDEQDKEVEAVHQLHPAGI
VLTRAGYYTIPSLEELARLTNDRNECIVTDFTIGRKGYGSIYFEGEVNLTNLNLDEIVHI
RRKEVIVYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMNYEGRLEA
VSRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEDHPLKVDTKKLKTTPVPPPGH
LPPQQMALNGKPAPPAQPPELEQLGRVVELDSDMADITQEPAQEPLAEDALAEEQEAVPA
STHIASTQGINPYVLQIMKASLLADDDDLDLILDYPGKQPVKMDTSQEICSPRLPISKSQ
GQKRHTVAGLLQSKFANVLFQAPSAAVADAKGPRTLGSPPSAALWSAASPLASAFAVPPA
VPEVQVKTVGVRRQRGLVPLERSITYGKGKLLMDMGLFMGRSFRVGWGPNWTLVNCGDPL
SGSSEVEDAQLEPVEYGFLPTPVAPKSLTESPFKVHVEKLSLEQWKMDRDKELYLTPLEI
KLKHSTVHMDEPCPLLAPNPGVSAIHDYADWARKASEDPTVAETVVKHWCLAWTLCEAIW
GTLKELEASLEEPSEYMLALERRRAFSRWLSETAAGRIEDEVSLSRHGSHVEAVFSCLTG
KRISEACRLAQQAGDHRLALLLSQLAGSQPVRDLLTLQLVDWHRLHSDRFIQEERLRLFA
LLAGKPVWQLSERISINVCSLLDWKRCVAVHLWYLLPPTASISKALAMYESAFQNTSECE
KYACCPLPPYLEDSGCVIEEDDNAGRPLRDVCFHLLKLYSDRSYELDQLLDPRSVTSDPL
DFRLSWHLWEVLRALNYSHLSQQSWGVLNTSYAAQLESEGLWEWAVFVMLHEPDTHIREK
AVRELLSRHCALAETPESWAKETFLTQRLCVPPHWIHEAKAVRARMEGDKHKEALFLFKA
GHWNQCHKLVVRHLASDAIINENYRYLKGFLEDLAPPERSALIQDWELAGLVYLDYIRVN
EMLDRIQQLDCSTYELERLHTKVTSLCNRIEQLQCHNAKDRLAQSDMAKRVANVLRVVLS
LQQGPEPGPEPAEPRVPLRLLAPHIGRLPMPEDYALEELRGLTQAYLRELALAAH
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcctttggagctccgttcggaggcagcactggctttgggacgacttca
acttttgggcaaaatgccggctttggtaccaccagcggaggagcctttggaacgtcggcc
ttcggctccaacagcaacaccgggggcctcttcgggagcacgcagacaaagccaggaggg
ttgtttgggtcaaccacattcaaccaaccagccacctcctccaccagcactggctttggg
tttggaacatccactgggacatcaaacagcctcttcggaaccaccagcactggtggaggc
ctcttctcatcccagaacaatgcctttgcacagaacaagccagctggctttggaaacttt
ggtacgagcaccagcagtggagggctctttggcaccaccaacaccacttccaaccccttt
gggagcacatctggctctctctttggcccaaccagctttactgctgctccaactggcacg
actattaaatttaatcccccaaccggcaccgacaccatggtgaaatccggcgtcagcacc
aacatcaacaccaagcaccagtgcatcactgccatgaaggagtacgagagcaagtccctc
gaggaactccgtttggaagactaccaggcaaataggaaagggcccacgaatcctgtagga
gcaggagcaactgctggcttgtttggctcttccactgccacatccagcacagccacagga
ctttttggctcttccactaccaatacaggcttttcttatggacagaataaaactgctttt
ggaaccagtacgaccggctttggcaccggcaccacgggtgggctctttgggcagcagtcc
cagaccacgagtctgttcaacaaaccctttggccaggccaccaccacgcagaacaccggc
ttctccttcgggggcaccagcaccctgggccagcccaacaccagcaccatgggtctcttt
ggggtcacccagccctctcagcctggaggcctttttgggacagctgccaatacaaatgct
gggactggatttggaacgggaactggcctttttggacaagccaacacaggatttggtgtt
ggtggttcgaccctgtttgggaacaagcctgctggatttggagccaccacgaccagcgct
ccctcattcggtaccaccacgggcggcggccttttcggttttggtgccaacactgctgga
aatagcttgtttggaaataagcctgcgactgggactctgggaactggacttgggacaggg
tttggaacagctctgggggcaggacagacgtccttgttcgggaacacccagccaaagctg
gggggaacgctgggaacgggagcattcggagccccaggattcaacacctccacagctacc
ctgggctttggggcccctcagcctgcagtagctctgacagaccccaatgcctctgcagcc
cagcaagctgtcctccagcagcacctcaacagcctgacctactcaccctttggagactcc
ccactcttcagaaaccccatgtcagacccaaagaagaaagaagagaggctgaagccaacc
aacccagcagcccagaaggccttgacaacccccacccactacaagctgaccccacgccct
gcgaccagagtgcggcccaaggccctgcagtcggcgggctcggccaagtcccagctcttc
gatgggctggatgatgatgagccctccctgtccaatggagccttcatgccaaagaagagc
atcaagaagctggttctgaagaacctcagcagcagcaacctgttctctcccgtgagccga
gagaacgaggacctggcgtcgccgtcggagtaccctgagaacggggacaggttcttcctg
tcggtgcctcccgaggagaaccacaggcaggacggggaacaggaggaggaggaggaggcc
cacgaggtgaccaggttttacaccaatcccattgccaagcccatcccacagaccctggag
ggcagcgggcacaagccccactcgagcgtggacgacaccatcgtggcgctgaacatgcgc
gcggccctgcgcaatgggctggagggcagcagcgaggacgcctccttccaggaggattcc
ctgcaggatgagcaggacaaggaggtggaagctgtgcaccagctgcatcctgcagggatt
gttctgacacgagctgggtactacaccatcccctccctggaggagctggcccggctgacc
aacgacaggaacgaatgtattgtgacagacttcaccatcggccgcaagggttatggatcg
atttacttcgaaggagaagtaaacctaacaaacttaaacctagatgagatcgtacacatc
cggagaaaagaggttattgtttaccctgacgacgaaagaaaaccacccattggggaaggg
ttaaacaggcgagctgaggtcaccctggacggggtgtggcccacggacaaaacgtcgcgg
tgcctgatcaagagccccgagcgcctggccgagatgaactacgagggccggctggaggcc
gtgtcccgcaagcagggcgcccgcttcaaggagtaccgcccagagaccggctcctgggtc
ttcaaggtagcacacttttccaagtatggcttgcaagattcagatgaggaagaggaagat
catcctttaaaagtggacaccaagaagttaaagaccacacctgtgccacccccagggcac
ctgcctccccagcagatggccctgaacggcaaaccagcgcccccagctcagcccccggag
ctggagcagctgggcagggtggtggagctggacagtgacatggccgacatcacccaggag
ccagcccaggagcccttggcagaggacgccctggcagaggagcaggaggcagtgccagca
tccacccacatcgcatccacccagggcatcaacccctacgtcctgcagatcatgaaagct
tccttgcttgctgatgatgacgacctggatttgatcctggattatcctgggaagcagcct
gtcaagatggacacttcccaagagatctgctccccgaggcttcccatttcaaaatcacaa
ggacagaaaagacacacagttgctgggctgctgcaatccaagtttgccaatgtccttttc
caagcaccgagtgctgctgtggcagatgccaagggcccgaggactttgggcagccccccc
tctgctgccctgtggtcggcggcgtccccgctggcctcggcgttcgccgtgcccccggca
gtgcccgaggtgcaggtgaagacagtcggggtccgcaggcagcgcgggctcgtccctctg
gagaggtccatcacctatggaaaagggaagctcctgatggatatgggactcttcatgggg
cgctcattccgtgttggttgggggcccaactggacactggtcaattgtggagatccgttg
agtggctcgagtgaagtggaagatgctcagctggagcctgtggaatatggattcctgcca
actcccgtggctcccaaatcactcacagaatcccctttcaaggttcatgtggaaaagctg
agcttggaacaatggaagatggacagagacaaggagctgtatctcacccctctggagata
aagctgaagcacagcactgtccatatggatgagccctgtcccctcctggcccccaaccct
ggggtctctgctatccatgactatgctgactgggccaggaaagcatctgaggatcccact
gtggcagagaccgttgtgaagcactggtgcttggcctggacattatgtgaggccatttgg
ggcaccctgaaggagctggaggccagcctggaggagcccagtgagtacatgctggccctg
gagcgccgcagggccttctcgcgctggctttcggagacggcggccggacgcatcgaggac
gaggtgtccctgtcccggcacggcagccacgtcgaggccgtgttcagctgcctcactggg
aagaggatcagcgaggcctgcaggctggcacagcaggcaggtgaccaccgcctggccctg
ctgctgtcgcagctggccgggagccagcccgtgcgggacctgctgaccctgcagctcgtg
gactggcaccgcctgcacagcgaccgcttcatccaggaggagcggctgcgcctcttcgcg
ctgctggcggggaagccggtgtggcagctctccgagaggatcagcatcaacgtgtgctcg
ctgctggactggaagcgctgcgtggccgtgcacctctggtacctgctgccccccacggcg
tccatctccaaggccctggccatgtacgagtcagcctttcagaacacctcagagtgtgaa
aaatatgcctgctgtcctctgcctccttacctggaagattctgggtgtgtcattgaagaa
gatgacaatgcaggaaggcccctgagagatgtctgcttccatttgttaaagctctacagt
gacaggtcctatgagcttgaccagctgctggatcccaggagtgtcacctctgacccgctg
gatttccgcctcagctggcacctgtgggaggtgctccgggccctgaactactcccacctg
tcccagcagagctggggggtgctgaacaccagctatgctgcccagctggagagcgagggg
ctgtgggaatgggccgtgttcgtgatgctgcacgagcctgacacacacatccgggagaag
gccgtgcgggagctgctgagccggcactgcgccctcgccgagacccccgagtcctgggcc
aaggagaccttcctgacacagaggctctgcgtccccccacactggattcacgaggccaag
gcagttcgggcaaggatggagggtgacaagcacaaagaggcccttttcctgttcaaggct
gggcactggaaccagtgccacaagctggttgtcaggcacttggcttcagatgcaattatc
aacgagaactacaggtacctgaaaggattcctggaagacctcgcgcctccggagcgcagt
gcgctcatccaggactgggagctggcggggctggtctacctcgactacatccgtgtgaat
gagatgctggacaggattcagcagctggattgttccacctacgagctggagcggttacac
accaaagtgacgtccctgtgcaacaggatagagcagctgcagtgccacaacgccaaggac
cgcctggctcagtcggacatggcgaagcgcgtggccaacgtgctgcgggtggtgctgagc
ctgcagcagggcccggagccgggcccggagccggcggagccgcgcgtgcccctgcggctg
ctggccccgcacatcggccgcctgcccatgcccgaggactacgcgctggaggagctgcgc
ggcctcacccaggcctacctgcgggagctggccctggccgcgcactga
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integrated database retrieval system
