KEGG   Aphelocoma coerulescens (scrub jay): 138104127
Entry
138104127         CDS       T10543                                 
Symbol
RBBP7
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
  KO
K11659  histone-binding protein RBBP7
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03082  ATP-dependent chromatin remodeling
acoe03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    138104127 (RBBP7)
   03083 Polycomb repressive complex
    138104127 (RBBP7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:acoe03036]
    138104127 (RBBP7)
Chromosome and associated proteins [BR:acoe03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     138104127 (RBBP7)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     138104127 (RBBP7)
    PRC2.2
     138104127 (RBBP7)
  Chromatin remodeling factors
   NuRD complex
    138104127 (RBBP7)
   NuRF complex
    138104127 (RBBP7)
SSDB
Motif
Pfam: WD40_CDC20-Fz CAF1C_H4-bd WD40 WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_EML EIF3I Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_RIG_1st Beta-prop_DCAF12 ANAPC4_WD40 eIF2A WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st MIOS_WD40 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 138104127
NCBI-ProteinID: XP_068859051
LinkDB
Position
1:16891167..16899783
AA seq 445 aa
MASKDGRSPRSALPGRAVGCEVLEDTVEERVISEEYKIWKRNTPFLYDLVMTHALEWPSL
TVQWLPDVTRPEGKDYALHWLVLGTHTSDEQNHLVVARVQIPSDDQFGALQYDSEKGAVE
FGGFGSVTGKIEMEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPS
GECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKIVEAKAIFT
GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSDATSKPSHSVDAHTAEVNCLSFNPY
SEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNV
WDLSKIGEEQSAEDAEDGPPELLVPFCSGFSVLTCCVAVMFCHCAAKTAAVHKSFHLPGF
QSIALICCRLPLFSSEGFPISCVTL
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggcgagcaaggacggtaggagcccccgctccgctctccccggccgggcggtggggtgt
gaggtgctggaggacacggtggaggagcgtgtcatcagcgaggagtacaagatctggaag
aggaacacccccttcttgtacgacctggtgatgacacacgccctggagtggcccagcctc
acggtgcagtggctgcctgatgtgaccaggccagaaggaaaggattatgctctgcactgg
ctggttttgggaacacacacgtccgatgaacagaaccatctggttgttgccagagtccag
attcccagcgatgatcaatttggtgctttgcagtatgacagtgagaaaggagctgtagaa
tttggtggctttggatctgtgactggcaaaattgagatggagattaaaattaaccatgag
ggtgaagtgaaccgtgcccgatacatgccgcagaatccctgcatcattgcgacaaaaaca
ccctctgctgatgtgctggtgtttgactacactaaacatccttcaaaaccagacccaagt
ggagagtgtaatcctgaccttagattaagaggacaccagaaggaaggctatggcttatca
tggaactcaaatttgagtggacatcttctcagtgcatcagatgatcatacggtgtgttta
tgggatataagtgctggacccaaagagggcaagattgttgaggcaaaagccatctttact
gggcactctgcagtagtggaagacgtggcatggcacctgctccatgagtctctgtttgga
tccgtggcggatgatcagaagcttatgatctgggacacaagatctgatgccacgtccaag
ccgagtcactcagtagatgctcacacagccgaggtcaactgtctgtccttcaatccttac
agcgagttcattctggcaactggctctgctgacaagacagtggctctatgggatcttcga
aacttaaagctgaaactccattcttttgagtctcataaggatgagatttttcaggttcac
tggtctcctcataatgaaaccattcttgcttcaagtggtaccgatcgtcggcttaacgta
tgggatctaagtaaaattggagaagaacagtctgcagaggatgccgaagatggccctcct
gagctgctggtacccttttgttcaggtttcagtgtgctgacatgctgtgtggcagtgatg
ttttgtcactgtgctgctaaaactgcagctgttcataaatcatttcacctccctggtttc
cagtccattgctctcatttgctgtaggcttcctctgttcagttctgaaggtttccccatt
tcctgtgtgactctgtaa

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