Aphelocoma coerulescens (scrub jay): 138104129
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Entry
138104129 CDS
T10543
Symbol
POLR3B
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03020
RNA polymerase
acoe04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
138104129 (POLR3B)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
138104129 (POLR3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoe03021
]
138104129 (POLR3B)
Enzymes [BR:
acoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
138104129 (POLR3B)
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
138104129 (POLR3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
138104129
NCBI-ProteinID:
XP_068859049
LinkDB
All DBs
Position
1A:complement(57196678..57272219)
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AA seq
1130 aa
AA seq
DB search
MEALGLGALTPEQAAAPVNTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKAN
EKVTSDADPMWYLKYLNIYVGTPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRG
SQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQE
QLSKNRIIVEADRKGTVGASVTSSTHEKKSRTNMVVKQGRFYLRHNTLSEDIPIAIIFKA
MGVESDQEIVQMIGTEEHVMAAFAPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGPKK
TKMEEARELLASTILTHVLVKEFNFRAKCIYTAVMVRRVILAQGENKVDDRDYYGNKRLE
LAGQLLSLLFEDLFKKFNSELKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAISTGN
WSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSD
TPEGEACGLVKNLALMTHITTDMEDGPIIKLASNLGVEDVNLLCGEELSYPNVFLVFLNG
NILGVIRDHQKLVNTFRIMRRAGYINEFVSISTNLSDRCVYISSDGGRLCRPYIIVKKQK
PAVTNKHMEELAQGYRNFEDFLHEGLVEYLDVNEENDCNIALYENTINKDTTHLEIEPFT
LLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTK
TIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKRYT
NQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQTPLEGS
SVPQQPQYKDVPVTYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSRHGQ
KGVCGLIVPQEDMPFCDTGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYGTA
FGGSKVKDVCEDLIRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHAR
ARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQC
GLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLAKYNE
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgctgggtctcggcgcgctgaccccggagcaggcggcggccccggtcaacacg
gtggaggaaaaatggagacttcttccagcatttctgaaggtgaaagggctggtgaagcag
cacatagactcattcaactatttcatcaatgttgagataaagaaaatcatgaaggccaat
gaaaaagttacaagtgatgccgacccaatgtggtacctgaagtacctcaatatctatgtg
ggtactccagatgtggaagaaagcttcaatgtgacacgacctgtatcacctcatgagtgc
cgcctgagggacatgacctattctgcgccgattaccgtggatattgagtacacccgaggc
agccagaggatcatccgcaatgcgttacccattggcagaatgcccataatgctgcgtagc
tccaattgtgtacttactgggaaaactccagcagagtttgccaaactaaatgagtgtccg
ttagatccaggtggctatttcattgtcaaaggtgtagagaaagtcattcttattcaagag
cagttatccaaaaacagaatcattgtggaagctgatagaaaaggcacggttggcgcttct
gttaccagttccactcatgagaagaagagcagaacaaatatggttgtgaaacaaggaaga
ttttacctgaggcacaacactctgtcagaagatattcccattgctatcatatttaaggcc
atgggtgttgagagtgaccaggagattgtacagatgattggcacagaggaacatgtgatg
gctgcatttgctcctagcctggaagaatgccaaaaagctcagatttttacacagatgcag
gcattaaagtacattggaaacaaagtacgaaggcaaaggatgtggggaggcccaaagaaa
acaaagatggaagaagcccgagagctgctggcatcaaccattctgacccatgttcttgtg
aaagaattcaattttcgtgccaagtgcatatacacagcagtgatggtacgcagagtaatt
ttggctcaaggagaaaataaggtagatgacagagactactacggaaataagcgtttggaa
ctggcagggcagcttctttctcttctgtttgaagatttgttcaaaaaatttaactctgag
ctgaaaaagattgctgaccaggtcatccccaagcagcgtgcggctcagtttgatgttgtg
aagcacatgcgacaggaccagatcaccaacggcatggtcaatgccatctccacaggaaat
tggtctctaaagaggttcaagatggaccgccaaggcgtgacacaagtcttgtcccgcttg
tcttacatatctgctctgggaatgatgaccaggatctcttctcagttcgaaaagaccagg
aaagtgagtggtcctcgatcgctgcagccatctcagtgggggatgctctgcccttctgac
actcctgagggagaggcctgtggtttggttaaaaacctggccctcatgactcatattact
acggatatggaagatggcccaattattaaattagccagtaatcttggagttgaagatgtc
aacttgctctgtggtgaagaactttcatacccaaatgtgttcctggttttccttaatggt
aacatccttggtgtcatacgtgatcaccagaaattagtcaacacctttcggataatgcgt
cgagcgggttacatcaatgaatttgtttccatctctacaaatctgtctgacagatgtgtc
tacatctcctctgatggagggagattgtgcaggccttatataattgtcaagaagcaaaaa
cctgcagttacgaataagcatatggaagaactggctcagggatacaggaattttgaagac
ttcttgcatgaaggccttgtcgaatatttggatgtgaatgaagaaaatgactgtaacatt
gcactatatgaaaatacaatcaataaagatacaacccatttggagattgagcctttcacg
cttctgggcgtctgtgctgggctgattccgtatcctcaccacaaccagtccccaagaaac
acttaccagtgtgccatggggaaacaagccatgggtactattggatacaaccaaagaaac
aggatagatactctgatgtatctgctagcctatccacaaaagccaatggtaaaaacaaaa
acaatagaactgattgattttgagaaactccctgctggacagaatgccacagtcgctgtg
atgagctacagtggctatgatattgaagatgctcttgtcttaaataaggcctctttggac
agaggtttcgggaggtgtcttgtgtacaagaatgccaagtgtacactgaagcgttacaca
aaccagacatttgataaagtgatggggccgatgctggatgcagctacccgtaaaccaatc
tggcgccacgagattttagatgctgatggtatctgctctccaggtgaaaaagtagaaaat
aagcaagtccttgtgaacaaatctatgccaactgtgacccagacacctctggaaggaagc
agtgtgcctcagcagccacagtacaaagacgtaccagtaacctacaaaggcgccactgat
tcttacattgaaaaagtaatgatttcatcaaatgcagaagatgctttcttgatcaaaatg
ttgctgaggcaaaccagacgtccagaaattggagataaatttagcagtcgtcatgggcag
aaaggggtgtgtggactgattgttcctcaggaggacatgccattctgtgatacagggatc
tgcccagatatcataatgaaccctcatggcttcccatcgcgtatgacggtaggaaagttg
attgaactcctggctggaaaggctggggtgcttgatggcagatttcactatggaacagct
tttggcggcagtaaagttaaggatgtgtgtgaagatcttattcgccatggttataactac
ctagggaaggactacgtaacatctgggatcactggagaacctttggaagcatatatttat
tttggtcctgtgtattaccagaaactgaagcacatggtgttggataaaatgcatgcaaga
gctcgaggacccagagcagtgctcaccaggcaacccactgaaggtcgatcccgtgatggt
ggtttacgtcttggagagatggaacgggattgtttgataggttatggagccagcatgctt
ttattggagagactgatgatttcaagtgatgccttcgaagtggatgtttgtggacagtgt
ggcttgctggggtactctggctggtgccactactgcaaatcatcttgtcacgtgtcttct
ctgcgcataccttatgcctgtaaactcttattccaagaactgcagtccatgaacatcata
cctaggctaaaactagctaagtacaatgaatga
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