Aphelocoma coerulescens (scrub jay): 138104141
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Entry
138104141 CDS
T10543
Symbol
HCFC2
Name
(RefSeq) host cell factor 2
KO
K27390
host cell factor 2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138104141 (HCFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138104141 (HCFC2)
03029 Mitochondrial biogenesis [BR:
acoe03029
]
138104141 (HCFC2)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
138104141 (HCFC2)
Mitochondrial biogenesis [BR:
acoe03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
138104141 (HCFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
Beta-prop_TYW4
NANM
Motif
Other DBs
NCBI-GeneID:
138104141
NCBI-ProteinID:
XP_068859077
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All DBs
Position
1A:complement(58018431..58059767)
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AA seq
805 aa
AA seq
DB search
MAAAAAGLSWRRVSSFTGPVPRSRHGHRAVAIRELLIIFGGGNEGIADELHVYNTVTNQW
FLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNDLYELQASRWLWKKVKPQAPS
NGSPPCPRLGHSFSLYGNKCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSI
PVTKGILPSPRESHTAIVYCRKDVGSPKMYIFGGMCGCRLNDLWELDIETMTWSRPETKG
TVPLPRSLHTANVIGNKMYVFGGWVPQSAGGEISASDGEWKCTGSFSYLNLDTTEWIGLI
SDCQEDKSNLLPGPRAGHCAVAVGTRLYIWSGRDGYRKAWNNQVCCKDLWYLDTERPLAP
SQVQLIRATTNSFQLKWDEVPTVEGYLLQLHADSPVPPVAGIPGTGVPETSVLSSQGGCS
LHQSPQSLPSVPYPEMKVDHPSQTNNLVPNNVQVSLSSNSKVEGKEKVAAPENKVTQETV
KNHADATGFKESNAPSLLPVCTSSAQTSANVGELHDLDKQTVNPDASVSSTVSSTQTMVT
QQAVKTESSSTNGAVVKDETSLTTFNSKSEAAETAYVMPSARVNTGQTNDSHSSRAPQRP
PAPVKARDRRWYDVGIFKNNSAVVSQFYLLPEETLNINSKTEGADVPDYRLLKKQDLFPG
TVYRFRVAAINGCGVGPFSKISEFKTCIPGFPGAPSTVKITKSVDCIHLSWEPPASPSGN
ILEYSAYLAIRSTQLQENPSQLVFMRIYCGLKTSCIVTAAQLSNAHVDYTSRPAIVFRIS
AKNERGYGPATQVRWLQDMKTSGSK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgccgccgggctgagctggaggcgggtgtcctccttcacggggccggtg
ccgcgctcccgccacgggcaccgtgcggtcgccatccgagagctgctcatcatcttcggc
ggcggcaacgagggcatcgccgacgagctgcacgtctacaacacggttacaaatcagtgg
ttccttcctgctgtaaggggagatattcctccaggctgtgcagcacacggatttgtttgt
gatggtaccagaatactagtttttggaggaatggttgaatatggaagatatagcaatgat
ttatatgaattgcaggcaagtcgatggctgtggaaaaaagtaaaacctcaagctccttca
aatggatcaccaccctgtcctcggcttggtcacagcttttctttatatggtaacaagtgc
tatttatttggtggcctggcaaatgaaagtgaagattcaaataataacgttcccagatat
ttaaatgatttctatgaactggagctgcaacatgggtctggagtggttggctggagcatt
cctgtgaccaaaggaatcttgccatctccccgagaatctcacacagccattgtgtactgc
agaaaagatgtgggaagcccaaagatgtatatttttggagggatgtgtggctgtcggctt
aatgatctctgggaacttgacatagaaaccatgacctggtcaagaccagaaaccaaaggg
acagtaccacttcctcgcagtctccatacagccaatgtaataggaaacaaaatgtatgtt
tttggtggatgggttccacagtcagcaggaggtgaaatttctgcttctgatggtgaatgg
aaatgcaccggttcattttcttaccttaatttggataccacagaatggataggtctgatc
tcagattgccaggaggacaaaagtaacttgttaccagggccaagagcaggacactgtgct
gtagctgttggcactcgtctgtatatctggagtggtagagatggttacagaaaagcttgg
aacaatcaagtttgctgcaaagatctttggtaccttgatactgagagacctctggcacca
tcacaggtacaactgattagagctacaaccaactcttttcaactgaagtgggatgaagtc
cctacagttgaaggatatcttcttcaattacatgctgactcaccagtgccaccggtggct
ggaattcctggtactggcgttcctgagacatctgtgctgagttcacaaggtggctgttct
ctacatcaaagtccacaatcattgcctagtgtcccttatccagaaatgaaggtggatcat
cccagccagacaaataatctcgttcctaataatgtccaagtttccctttcatccaattca
aaagtagaaggaaaagaaaaggttgcagcacctgaaaacaaggttacacaggagactgtg
aaaaaccacgcagatgctacgggattcaaagaatcaaatgccccttctcttttgcctgtt
tgtacttcaagtgctcagacatcagcaaatgtaggtgaattacatgacttggacaaacaa
actgtaaatcctgatgcttctgtatccagtactgtctccagcacacaaactatggtaacc
cagcaggctgttaaaactgagtcatcaagtacaaatggggcagttgttaaagatgaaact
tcactaacaacattcaattcaaaatctgaagctgctgaaactgcttacgtcatgccttca
gcaagggtcaatactggacagacaaatgattcacactcctctagagctccccagaggccg
ccggcaccggtgaaagccagggaccgccggtggtatgatgtgggaatttttaagaacaac
agtgctgtggtgagccagttctacttgctgcctgaggaaacactgaacatcaatagcaag
acggaaggtgcagatgtaccagactacagattacttaagaaacaggatctgtttccaggc
accgtgtacaggttcagagttgctgcaattaatggatgtggtgttgggcctttcagtaaa
atcagtgaattcaagacatgcattccaggttttcctggagctccttcaacagtcaaaatc
accaagagtgtcgactgtattcatctttcttgggagcctcctgcttcaccctctggaaat
attttagaatattctgcctacttagccatccgttccacacaattacaggaaaatccaagt
caacttgtgtttatgaggatatactgtggtcttaaaacctcctgtatagtgactgctgcc
cagctttccaacgcccacgtggattacacctcccggcctgccatagtgttcaggatttcg
gccaagaacgagagaggctacggcccggccacgcaggttcggtggctccaagacatgaaa
acatcaggctcaaagtag
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