Aphelocoma coerulescens (scrub jay): 138104226
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Entry
138104226 CDS
T10543
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
acoe01001
]
138104226 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoe04121
]
138104226 (TRIM24)
Enzymes [BR:
acoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138104226 (TRIM24)
Protein kinases [BR:
acoe01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
138104226 (TRIM24)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138104226 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
PHD-1st_NSD
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
138104226
NCBI-ProteinID:
XP_068859304
LinkDB
All DBs
Position
1A:63820450..63993344
Genome browser
AA seq
1045 aa
AA seq
DB search
MEEAAAAVAAAVAGGPCPAERPGAAAAALSGENEAESRQGPAERGGDAAPLNLLDTCGVC
GQPIQSRRPKLLPCLHSVCQRCLPQPDRYLMLPPVLTLAAAAAPKEPPPAAPPSSPVSSP
ASPLHCTPVGVIRCPICGQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNAEAH
GFCVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPYHKKEQLKL
YCETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIETLITKLMEKTKYIKYTGKQIQN
RILEVNQNQKQVEQDIKVAIFTLMVEINKKGKALLHQLETLAKEHRMKLLQQQQEVAGLS
KQLEHVMNFSKWAVSSGSSTALLYSKRLITYRLRYLLRARCDPSPVTNNTIQFHCDPSFW
AQNIFNLGSLVIEDKETPPHMPKSPVMEPNLQPPGSLPSNQLSKFPTQISLAQLRLQHMQ
QQVMAQRQQAQRRAGPAVLPNPRMPGAMQQPPASHQAPPRLIHFQNHSPKPNGSALPTQQ
MRFPQNQNLPRPAVKPNPLQMAFLAQQAIKQWQISSGQTSTTPSTASSTTSTPSSPTVTS
AAGCDGKNYGPPVIDLSSPVGSSYNLPSLPDIDCSGNITLDTAVRKDDTVEQNQPKPPSN
RTVQSPNSSVPSPGLSGGISVTNVHPPIRSPSASSVGSRESSGSSSRPPGADSTHKVPVV
MLEPIRIKQESSAPNENFDFPIVVVKQETEEESRPRNSILTSLLLDTNHNSTSDEAVLRT
DAPDSTDDQPGVLQENTFTGKTGWMGSSHTGEGRKEDDPNEDWCAVCQNGGKLLCCEKCP
KVFHLSCHVPTLMNFPSGEWICTFCRDLSKPEVEYDCDKPAHGSEKRKLEDTVGLAPIDR
RKCERLLLYLYCHEMSPAFQDPVPPTVPDYYKIIKKPMDLSTIKKRLEVTNSFYTKPEDF
VADFRLIFQNCAEFNEPDSEVADAGMKLEAYFEDLLRNLYPERKFPVQPSSQSEKENPEL
TDDSDDDFVQPRKKRLKGEDRQLLK
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggcggcagcggcggtagcggcggcggtggcgggggggccgtgcccggcggag
cgaccgggggcagcggcggcggcgctgagcggggagaacgaggccgagagccggcagggc
ccggcggagcgcggcggggacgcggccccgctcaacctgttggacacttgcggcgtgtgc
gggcagcccatccagagccggcggcccaagctgctgccctgcctgcactcagtgtgccag
cgctgcctgccgcagcccgaccggtacctcatgctgccccccgtcctgaccctcgcggcc
gccgccgcccccaaggagccgccaccggccgcgcctccctcctcgcccgtctcttcgccg
gcctcacccctgcactgcacgcccgtcggtgttatccgctgtccaatttgtggtcaggaa
tgtgcagagagacacatcatagataacttttttgtgaaggataccacagaggttcccagt
agcacagtagagaaatcaaatcaggtctgcacaagctgtgaagacaatgcagaagctcat
gggttttgtgtggaatgtgtagagtggttgtgcaagacctgcatccgagctcaccagagg
gttaaattcaccaaggatcatactgtgaggcagaaagaggaagtatctccagaggcagtt
ggtgtgaccagtcagcgaccagtgttctgcccttaccacaaaaaggagcagctgaagttg
tattgtgagacctgtgacaagttgacctgccgagactgtcagttactagagcacaaagag
cacaggtaccagtttatagaagaagcttttcagaaccagaaagttatcattgagacacta
atcaccaaattgatggagaagactaagtacataaaatatacagggaaacagatccaaaac
agaattcttgaagtgaatcagaatcaaaagcaggtggaacaggatattaaagttgccata
tttacactgatggtagaaataaataaaaagggaaaagcactgctgcatcagttggagact
ctggcaaaagagcatcggatgaaacttctgcagcaacaacaggaagtggcaggtctctct
aaacagctggaacatgtgatgaatttttccaaatgggcagtttccagtgggagcagcaca
gcgctcttgtacagcaaacgcttgatcacatatcgactacggtatcttctccgagcaagg
tgtgatccttcaccagtgactaacaataccatccagttccactgtgatcctagcttctgg
gctcagaatattttcaatctaggttctttggtcattgaagataaggaaactccaccacat
atgcccaagagccctgtgatggaaccaaacttacagccaccaggcagcttaccttccaac
cagctctccaagttcccgacacagatcagcttagcgcagctccgactccagcacatgcag
cagcaggtcatggctcagagacagcaagctcaacgcagagcaggaccagcagttctacca
aacccaagaatgccaggagccatgcagcaacctcctgcttctcatcaggcacctccgcgc
ttgattcatttccagaatcatagccccaagcccaatggttcagctcttcctacacaacag
atgagatttccccaaaatcagaacctgccaaggccagcagtaaagcccaacccattgcaa
atggcattcttggcacagcaagctataaaacagtggcagatcagtagtggacaaacttca
accaccccttcaactgcaagcagcacaacatcgactccatccagccccacagtcaccagt
gctgctgggtgtgatggaaagaattacggtccccctgtgatagatttgagttccccggtg
gggagctcctataatctaccatctctccctgatattgattgttcaggaaatatcacactg
gatactgctgtaaggaaggatgacactgtagagcagaatcagccaaaacccccttcaaac
aggactgtgcagtcaccaaattcctcagtaccatcaccaggcctctcaggaggaatcagt
gtgacaaacgtacaccctccaattcgttcacctagtgcctccagtgttgggagcagagag
agttctggctcctccagcaggccaccaggagctgactctacacacaaagtcccggttgtt
atgttggagccgatccgaattaaacaggagtcaagtgcaccaaacgagaactttgatttc
ccaattgttgtggtgaagcaagagacggaggaggaatcccggcctcggaattccatactg
acttcattgctgctggataccaatcacaattccacttctgatgaagctgtgctaagaaca
gatgcaccagacagcacagatgaccagccaggggtactgcaggagaacacattcactggg
aaaacaggatggatgggatcctcccacactggggagggcagaaaagaggatgatcccaat
gaagattggtgtgctgtgtgtcagaatggagggaagctcctttgctgtgagaagtgtccc
aaagtattccatctttcttgtcatgtccctacattgatgaactttccaagtggagagtgg
atttgtacattctgtcgggatttgtccaagccagaagttgagtatgactgtgataaacct
gctcacggctctgaaaaaagaaaattggaagacaccgtgggtttggcacccatagaccgt
aggaagtgtgaaagactgctgctgtacctctactgccatgaaatgagtcctgcctttcaa
gatccagttcctcccacagtccctgattactacaaaataatcaaaaagcctatggacttg
tctaccatcaagaagagacttgaagtgaccaattcattctacacaaagccagaagatttt
gtggctgatttcagactgattttccaaaactgtgctgaatttaatgagcctgactcagaa
gtggctgatgccggcatgaaactcgaagcctactttgaagatcttctaaggaacctttat
cctgagagaaagttccctgtacagccaagcagccagagtgaaaaagagaatccagaactt
actgatgactccgatgatgactttgtacagccccggaaaaaacgcctcaaaggagaagac
cgtcagttgcttaaatga
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