Aphelocoma coerulescens (scrub jay): 138104258
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Entry
138104258 CDS
T10543
Symbol
PPFIBP1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138104258 (PPFIBP1)
Membrane trafficking [BR:
acoe04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
138104258 (PPFIBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
138104258
NCBI-ProteinID:
XP_068859397
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All DBs
Position
1A:complement(65362117..65464705)
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AA seq
1038 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGGLRALHLVEDLRGLLE
MMEADEREGLRCQVPDSTAEALIEWLQSQMTNGHISGNGDVYQERLARLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTTLETQKLDLMAEISTLK
LKLTSVEKDRLDYEDRFRDTEDLIQEINELRLRVGEMDNERLQYEKKLKTTKSLMAKLSS
MKIKVGQMQYEKQRMEQKSQMLKDELSALKDKLEQKEAEVKRLHEKLVCKLKGEGIEILD
RDENCKKKLKDKNIEVQKMKKAVESLMAANEEKDRKIEELRQSLNRYKKVQDMVILAQGK
KGKESESEDLNSGSVSMGLLDTPSLTDPEKSPSPTPVTASPIHDEFNVNIHEENSLQIHT
SILQISIPSLSSTSKSSETVAERLKIHPRPEPASEMSEGRSTGSSPETHLCDSPVTSSLQ
KSSSLSSLRKEASEMDRDCAQKPAEQVKPPLEGNNFATLPPKSPSHGATGDEDSFGTRKA
RSSFGRGFFKIKNNKRTASAPNLDRSRSASAPTLAETEKGSADHLDLAGLPPRPKEADSL
QMAPPSPDSRKKARGIKKLFGRLKRSQSTTFNPDDMSETEFKRGGTRATAGPRLGWSRDL
GQSYNELDMPFAKWTKEQVCNWLQDQGLGSYISNGRHWILSGQTLLQASQQDLEKELGIK
HPLHRKKLQLALQALGSEEENNHGKLDYHWVTRWLDDIGLPQYKTQFDEGKVDGRMLHYM
SVDDLLSLKVVSVLHHLSIKRAIQVLRINNFEPNCLRRRPSDENNVTPSEVTQWTNHRVM
EWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMAQLLNIPPNKTLLRRHLATHFNLL
VGQEAQQQKREAMESPDYVLLTATAKVKPKKLTFSNFGSLRKKKQDDVEEYVCPMELGRA
SGSGSKKGFKPGLDIRVYDDDDLDRLEQMEDSEGTVRQIGAFSEGINNLTHMLKEDEMFK
DFATRSPSTSITDEDSNV
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgatgcaagtgacatgctcgctgcagccctggagcagatggatggcataata
gcaggttccaaggcactggaatactccaatggcatctttgactgccagtcccccacctcc
cccttcatggggggcctgcgggcactgcacctcgtggaggacttgcggggcctgctggag
atgatggaagcggacgagagggaggggctgcgctgccaggtcccggactccacggcggag
gctctcatcgaatggctccaaagtcaaatgactaatgggcacatatctgggaatggagat
gtttatcaagaaaggctggctcgtctggaaaatgataaggaatctcttgttctgcaagta
agtgtgcttacggaccaggtggaggcccaaggagaaaagatccgggatctggagttctgc
ctggaggagcacagggagaagctgaatgccacggaggagatgctgcagcaggagctttta
agcagaacaacccttgaaactcagaagctggatcttatggcagagatttccactctgaaa
ttaaagcttacatctgtagagaaggatagattggactatgaggacaggttcagagacaca
gaggatttgatccaggaaataaacgaattgcggttgagggtgggagaaatggacaatgaa
agactccagtatgagaaaaagctgaaaacaactaaatctttaatggccaaactttctagc
atgaaaatcaaagtgggtcagatgcagtatgaaaagcagcggatggagcaaaaaagccag
atgctaaaggatgaactgtcagctctgaaagacaaactagagcagaaggaagccgaggtg
aaaaggttgcacgaaaagttggtttgcaagctgaaaggagaaggaattgaaatactggac
agagatgaaaattgtaaaaagaagctcaaagataaaaatatagaggtacagaaaatgaag
aaggcggtagaatctctaatggcagcaaatgaagagaaggatcggaagatagaagagctt
cggcaatctctgaataggtacaagaaagtccaagacatggtgatactggctcaaggtaaa
aaaggcaaggaaagtgaaagtgaagacttgaattcagggtctgtttccatgggtttattg
gacacaccaagtctgactgacccagagaaaagcccatccccaaccccagtaacagcatct
ccaatccatgatgagttcaacgtgaatattcatgaagagaattccttacagatccacacc
agcattttacagatttcaatcccttccctttcatcaacatccaagagctcagaaactgtt
gcagagagactgaaaatacaccctaggccagagcctgccagtgaaatgagcgaaggaaga
tcaacaggttcttcccctgaaactcatctgtgtgatagtccagtaacttcctcactgcag
aagtccagcagtctgagcagtttgaggaaagaggcatctgaaatggacagagactgtgca
cagaagccagcagagcaggtgaaacctcctctggaaggcaataattttgcaaccctccct
cccaagtctccgtctcacggtgccacaggcgatgaggacagttttggcacccgcaaagcc
agatcttcctttggccgaggctttttcaagatcaaaaataacaagaggactgccagtgcc
cccaatctggatcgcagtcgaagtgccagtgcacctactttagctgaaacggagaaggga
tctgcagaccacttggatctggctggcttgccccctcgcccaaaagaagcagatagtctg
caaatggcaccaccttctccagattccaggaaaaaggccaggggaatcaagaagttgttt
ggaaggcttaaaagaagtcagtccaccaccttcaacccagacgacatgtctgagacggag
ttcaagagaggagggacaagagcaactgcagggccccggctgggctggtcacgggacctg
gggcagtcctacaatgagctggacatgccattcgcaaagtggaccaaggagcaggtttgc
aactggctccaggaccaagggcttggctcctacatcagtaatggcaggcactggatactg
tctgggcaaacacttctgcaggcttctcagcaggatctggaaaaggagctcgggataaag
caccctttgcatcggaagaagctccagcttgctctgcaggcactgggatctgaagaggaa
aacaaccatggaaaactggattaccactgggttaccaggtggctggatgacattggcctg
ccccagtataagacccagtttgatgaggggaaggtggatggccgcatgctccattacatg
agtgtggatgacctgctgtccttgaaggtcgtcagtgtccttcaccacctcagcatcaaa
agagccattcaggttttgagaataaacaactttgagcccaactgcctgcgcaggaggccg
tctgatgagaataatgtgacaccttctgaggtcacccagtggaccaaccaccgcgtgatg
gagtggctgcgctccgtggatctggcagagtacgcacccaacctgcggggcagcggagtg
cacggggggctgatggttttggagccccgtttcaatgtagaaaccatggcacagctgctg
aacatcccacccaacaagacgctgctgaggcggcacttggccactcatttcaacctcctg
gtggggcaggaggcccagcagcagaaacgtgaagccatggagtccccagactacgtcctc
ctgacagcaactgccaaagtcaagccaaagaaacttaccttcagcaattttgggagcctg
aggaagaagaagcaggatgatgtggaggagtatgtgtgtcctatggagctggggcgggca
tctggcagtggatcaaagaagggctttaagcctggcctggatatccgagtatatgatgat
gatgatttggacaggctggagcagatggaagattcagaagggacagtgaggcaaatagga
gcattttctgaaggcatcaacaacttgacacacatgttgaaggaagatgaaatgtttaaa
gactttgccactcgctctcctagcaccagtataacagatgaggactccaacgtgtga
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