Aphelocoma coerulescens (scrub jay): 138104335
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Entry
138104335 CDS
T10543
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138104335 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138104335 (NUP50)
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138104335 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
138104335
NCBI-ProteinID:
XP_068859581
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All DBs
Position
1A:complement(71254017..71270546)
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AA seq
468 aa
AA seq
DB search
MAKRIAEKELTDRNWDQEDEAEEVGTFSVASEEVLKNRAIKKAKRRNVGSESESGGAFKG
FKGFILPSGKGGGGFSGFGNGAGIKPLEGLSNGSSSVSGTPFSSLKGASETQSAFGSPMS
NGPTAAVFAEKKAVSPRANGGSQPCSSGSTLSVAHGSGTYHKQLAALNCSVRDWIVKHVN
TNPLCDLTPIFRDYEQYLASIEQQHGGSSDSSSENESSKTPGSRAVPAFGSSKLQQGSTF
LLNNKTEDTSDKKPEAASEKRDPLLGATSTVTFNFGKSVDSSVLGSLGSGTLSSFSFSPG
NSGLFGKDANQAKSVTAASTSLLEAQTDSGNSDDKGGEEEEEEPPKVIVNEIKEDDAFYS
KKCKLFYKKDNEFKEKGIGTLHLKPAGNEKTQLLVRADTNLGNILLNVLIPPKMPCTRTG
KNNVLIVCVPNPPIDEKNPAVPVTMLIRVKTSEDADELHKILLEKKEA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagaattgcagagaaggaactgactgaccgaaactgggaccaggaggatgaa
gctgaagaggtgggaacattctctgtggcaagtgaagaggtcctgaagaacagagctatt
aaaaaagcaaagcgccgaaacgttgggtcagagtctgaaagtggaggagcttttaaaggg
tttaaaggctttatattgccttctggaaaaggtggaggtggcttcagtggatttgggaat
ggtgcaggaataaagcctttggaagggctatctaatggaagcagtagtgtctctggtact
cctttcagcagtttgaagggcgcctccgaaacacaatcagcatttggatccccaatgtca
aatggtcccactgctgctgtgtttgctgagaaaaaggccgtgagcccaagagctaatggt
ggcagccagccctgctcatctggcagcaccttgagtgtggcacatggctctggcacctac
cacaaacagctggctgctctcaactgctccgtgcgtgactggatagtgaagcatgttaac
accaaccccctgtgtgacctgacccccatcttcagggactacgagcagtatttggcaagc
attgagcagcagcatggaggcagcagtgacagcagctctgagaacgaaagcagcaagacc
cctggctcacgggctgttcctgcgtttgggagttcaaagctccagcaaggctccacattt
ttgttaaacaacaaaactgaggatacctcagacaaaaaacctgaagctgcatcagaaaaa
agagacccattgttaggagctacgtcaactgtcacgtttaattttggcaagagtgttgac
agttctgttttgggttcccttggttcaggaacacttagtagtttctcattttctcctggg
aattcaggtttgtttggaaaagacgcaaaccaggctaagtctgtcactgcagcatccacc
agtttattggaagctcagacagacagtggcaatagtgatgacaaaggaggggaagaggag
gaagaagagccaccaaaagtcattgttaatgaaataaaagaagatgatgctttctactca
aagaagtgcaaactgttctacaaaaaggataatgaatttaaagaaaaaggcataggaaca
ttacacttaaaaccagcaggaaatgaaaaaactcaactcttagtacgagccgacaccaac
ttaggaaatatactattgaatgttctaattccacctaagatgccatgtacaagaaccgga
aaaaacaatgttcttatagtttgtgttcctaatccaccgattgatgagaagaatccagct
gttcctgtcactatgctaataagggtgaaaacaagtgaggatgcagatgaattgcacaaa
atcttactggagaaaaaggaggcttaa
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