Aphelocoma coerulescens (scrub jay): 138104429
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Entry
138104429 CDS
T10543
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like isoform X1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
138104429
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acoe02000
]
138104429
Transporters [BR:
acoe02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
138104429
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
138104429
NCBI-ProteinID:
XP_068859813
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Position
1A:79706203..79746331
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AA seq
600 aa
AA seq
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MGKMDNTSVELNSPSEVKQAALEEPEPISPEVVSTKKKKKEIPDRGSWKGKFDFLLSCVG
YAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLVFAGIPLFLLETALGQYTSVGGLGVWRLA
PMFKGVGLAAMVLSFWLNIYYIVIIAWALYYLFNSFTADLPWQNCGNAWNTDRCFSNYSL
NDTTNLTSAVTEFWERNMHQMSGGLGEPGTIRWPLAGTLALAWLLVYFSIWKGVEWTGKV
VYFSATYPYFMLFILLFRGVTLPGAKEGILFYLTPDFRKLSDSEVWMDAATQIFFSYGLG
LGSLIALGSYNTFHNNVYRDSIIVCCINSTTSIFAGFVIFSIIGFMSHITKKSVSELASS
GPGLAFLAYPQVVTQLPLSPLWSILFFSMLMMLGLDSQFCTVEGFITALVDEYPRVLRAR
KKIFIAVVCFISYLIGFSNITQGGIYVFKLFDYYSASGMCLLFLVFFETISISWCYGVNR
FYRNIEEMIGYKPCIWWKICWAFFTPLVCLGVFFFSVVEMTPLTLGKYVYPAWGQGIGWL
MALSSMVLIPGYMLYSFFTSSGTLRQRLQQMTQPRPEVHAQNNGLQPKTSLNGRISDAAV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagatggacaacacctccgtggagctgaattctccctctgaggtaaagcaggca
gccctggaggagccggagcccatcagcccggaggttgtgagcaccaagaagaagaagaag
gagatcccagacagaggttcctggaaggggaaatttgacttcttgctgtcctgtgtgggc
tatgctatcggtctgggcaacgtctggcgcttcccctatctctgcggcaagaatggagga
ggggccttccttatcccttatttcctgacgctggtgtttgctgggattcctctcttcctg
ctggaaactgctctgggccagtatacctctgttggtggactgggagtctggagattagca
cccatgttcaaaggtgtgggactggcagctatggttctgtccttctggctgaacatctac
tacattgtcatcatcgcctgggctctctactatctcttcaactctttcactgcagacctg
ccgtggcagaactgcgggaatgcctggaacaccgaccgctgcttctccaactactccctg
aacgacaccaccaacctcaccagcgctgtcaccgagttctgggagaggaacatgcaccag
atgtccgggggcctgggggagcctggcaccatccgctggcccctggctggcacactggcc
ctggcctggctgctggtctacttttccatctggaagggtgtggagtggacgggcaaggtg
gtgtatttctcagccacctacccctacttcatgcttttcatcctcttgttccggggagtc
acgctgccaggagccaaggaggggatcctcttctacctcacgcctgacttcaggaagctt
tctgactctgaggtctggatggacgcagccactcagatcttcttctcctatggcctgggg
ctgggctccctcattgctctggggagctacaacactttccacaacaacgtctacagagac
tccattattgtctgttgtataaactccaccacaagcatatttgcgggatttgtaattttc
tctatcattggcttcatgtcacacatcacaaagaagtcggtgtcagagctggcctcctca
ggtcctggactggctttcctcgcctacccgcaggttgtcacacagctgcccttgtcccca
ctctggtcaatcctcttcttctccatgctgatgatgctgggtctggacagtcagttctgc
actgtggaagggttcattacagccctggtggatgagtaccctcgagtcctgagagccagg
aagaagatcttcattgcagtggtctgcttcatctcttatctcattgggttctccaacatc
acccagggcggcatttatgtcttcaagctgtttgattactactcagccagtggcatgtgt
cttctctttcttgtcttctttgagaccatctcaatttcttggtgttatggtgtgaacagg
ttttacaggaacattgaagaaatgattggctacaagccttgcatctggtggaagatctgc
tgggccttcttcacacctcttgtctgcctgggtgtgttcttcttcagtgtggtggaaatg
acccctctgacactgggaaaatatgtctatcctgcgtggggacaaggcatcggctggctg
atggccctgtcctccatggttctgattccagggtacatgctctactctttcttcacctca
agtgggactctccggcagcgtttgcagcagatgacacagcccaggccagaggtgcacgct
cagaacaacggcctccagccaaagacgtccttgaatgggaggatctcggatgctgccgtg
tag
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