KEGG   Aphelocoma coerulescens (scrub jay): 138104494
Entry
138104494         CDS       T10543                                 
Name
(RefSeq) thyroid hormone receptor alpha-like
  KO
K05547  thyroid hormone receptor alpha
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe04080  Neuroactive ligand-receptor interaction
acoe04081  Hormone signaling
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    138104494
   04081 Hormone signaling
    138104494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:acoe03000]
    138104494
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:acoe03310]
    138104494
Transcription factors [BR:acoe03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    138104494
Nuclear receptors [BR:acoe03310]
 1. Thyroid hormone like
  1A. Thyroid hormone receptor (THR)
   138104494
SSDB
Motif
Pfam: zf-C4
Other DBs
NCBI-GeneID: 138104494
NCBI-ProteinID: XP_068859892
LinkDB
Position
1A:80033747..80040583
AA seq 239 aa
MHPCVVTYVSVPWVAGWEAQKKEQPMFGEEQYVRYGDPRHPPNPPGHPMALLGTPASPEY
LICSPGSAGTPWYIPSYLDKDEQCVVCGDKAASYHYRCIACEGCKVTWGRGLGGLSSAHW
VTPPCPPQGFFRRTIQKNLHPTYSCVIDKITRNQCQLCCFKKCISVGMAMDLVLDDSKRV
AKRKLIEENREWQQKEEMIKSLQHRPSAEEWELIRLVTEAHRSTNAQGSHWKQKRKFLT
NT seq 720 nt   +upstreamnt  +downstreamnt
atgcatccctgcgtggtcacgtatgtgtccgtgccctgggtggctggatgggaagcgcaa
aagaaagagcagccaatgtttggtgaagagcagtatgtcaggtacggggacccacggcac
cccccgaacccccccgggcaccccatggccctgctgggcacccccgcgtcccccgagtac
ctcatatgctcgccgggttctgcaggcactccgtggtacatccctagttacctggacaaa
gatgaacagtgcgtggtgtgcggggacaaggccgccagctaccactaccgctgcatcgcc
tgcgagggctgcaaggtgacttggggcagggggctaggggggctcagcagtgctcactgg
gtcactcccccatgccctccccagggatttttccgtcggaccatccagaagaacctgcac
cccacctactcctgtgtcatcgacaagatcacccgcaaccagtgccagctctgctgcttc
aagaagtgcatctccgtgggcatggccatggacctggtgctggatgactcgaagcgggta
gccaagcggaagctgatcgaggagaaccgggagtggcagcagaaggaggagatgatcaag
tccctgcagcatcgccccagcgccgaggagtgggagctgatccgccttgtgacagaagcc
caccgcagcaccaatgcccagggcagccactggaagcagaagcggaaattcctgacctga

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