Aphelocoma coerulescens (scrub jay): 138104725
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Entry
138104725 CDS
T10543
Symbol
RFX4
Name
(RefSeq) transcription factor RFX4
KO
K09174
regulatory factor X 4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138104725 (RFX4)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Other basic domains
RF-X
138104725 (RFX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
138104725
NCBI-ProteinID:
XP_068860055
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All DBs
Position
1A:complement(57102646..57181605)
Genome browser
AA seq
723 aa
AA seq
DB search
MTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHSTPATLQWLEENYEIA
EGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGI
AVKENSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPEFPNVKDLNLPAS
LPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIV
GVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFEL
SRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSREE
HRKLIIQLYQEFDHLLEEQSPIESYIEWLDSMVDRCVVKVAAKRQGSLKKVAQQFLLMWS
CFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQEKANELMRAMKGEGSTAE
IREEIILSEPAAPTPSPAPFSPAKSATSVEVPSAPSPISNQSPEYGGITATTGAMQSYTW
SLTYTVTTAAGSPAENSQQLPCMRSPHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYSNQ
HPHPMQSQYPSLPHDTAISGPLHYSAYHRSSSQYPFNGPTSRMEPCLMSSTPRLHPTPVT
PRWPEVPAANSCYTSSSMHSTRYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEATTG
WAK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgacagagagttggattgaacgatgtctcaatgaaagtgaaaacaaacgttattccagt
cacacctctctggggaatgtttctaacgatgaaaatgaggaaaaagaaaataatagagca
tcaaaaccgcattcaactccagctacactgcaatggctggaggagaactatgagattgca
gaaggtgtttgcattcctcgaagtgctctctacatgcattacttggacttctgtgagaaa
aatgacacacaacctgttaatgctgccagctttgggaagataataagacaacagtttcca
caactaacaacaagaagacttggaaccagaggccaatcaaagtaccattattatggaatt
gcagtgaaagaaaactcccagtattatgatgtgatgtattctaaaaaaggagcagcctgg
gtcaacgaaacaggaaaaaaagaagtaaccaaacagacagtggcgtattcaccacgatcc
aaactgggaacattgctgccagagtttccaaatgtcaaagatctaaatctgccagccagt
ctgccagaggagaaggtttctacctttattatgatgtataggactcactgtcagaggatc
ctagacactgtaataagagcaaactttgatgaggttcaaagttttcttctgcacttttgg
caagggatgcctcctcatatgctgcccgtactgggttcttcgactgtagtgaatatagtg
ggagtctgtgactcaattctgtacaaggcaatttctggagttttgatgccaacggtacta
caagccttacctgacagtttgacgcaggtgatccgaaagtttgcaaagcaactggatgag
tggctgaaagtagctctccatgatttgccagaaaacctacgaaatatcaaatttgagttg
tccagaagattctcacaaatactacggcgacagacatccctaaatcatctctgccaagca
tcaagaacagtgatccacagtgcagacatcacatttcaaatgctggaggactggaggaat
gtggatctgaatagcattaccaaacaaaccctctatactatggaggactcacgggaggaa
cacagaaagctcatcatacaactgtatcaggagtttgatcaccttttggaggagcaatcc
cccattgagtcgtacattgagtggctggattccatggtggacagatgtgttgtaaaggta
gctgccaagagacaaggctctttgaagaaagtagcacagcagtttctcctgatgtggtcc
tgttttggcacgcgagtgattcgggacatgactttgcacagtgcacccagctttgggtct
tttcaccttattcacttgatgttcgatgactatgtattgtacctgctagaatcactccat
tgtcaggagaaagctaatgagctaatgagggcaatgaagggagaagggagcacagcagaa
atacgagaagaaattattctgagtgaaccagcagctccaactccctccccagcgccattc
tccccagctaaatctgccacctcagtggaagtgccctctgccccgtcacccatcagcaac
cagtccccagagtatggtggcataacagctactacaggggctatgcaatcctacacctgg
tcactcacctacaccgtgacaacagctgccgggtcgcctgcagagaattcccaacagctg
ccctgcatgaggagtccacacgtgccttcctcgtctgtcacacaccgtatacctgtttat
ccccacagagaagaacacggatacacaggaagttacaactatggtagctatagcaaccag
catccccatccaatgcagagtcagtatccatccttaccacatgatactgctatttctgga
ccacttcactactcagcttaccacagaagctcttcacagtaccctttcaatggcccaaca
tcaagaatggagccctgtttgatgagcagcactcccaggctgcatcccacaccagtgact
ccacgctggccagaggtcccagctgccaactcctgctacacgagctcatccatgcactcc
acgagatatgggaattccagtgacatgtacacgcccttgacaacacgcaggaattctgag
tacgagcacatgcaacactttcccggctttgcctacatcaatggggaagccaccacaggc
tgggctaaatga
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