Aphelocoma coerulescens (scrub jay): 138104866
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Entry
138104866 CDS
T10543
Symbol
RPRD1A
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoe03021
]
138104866 (RPRD1A)
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138104866 (RPRD1A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
138104866
NCBI-ProteinID:
XP_068860242
LinkDB
All DBs
Position
2:99248503..99292781
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AA seq
311 aa
AA seq
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MSAFSEAALERKLSELSNSQQSVQTLSLWLIHHRKHSALIVSVWERELRKAKPNRKLTFL
YLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSESDESCKKHLGRVLSIWEERSVYEND
VLEQLRQALYGDRKVRKRTYDQIKVDENNCSPRSSPTDPPQTTDLIRALQELENAASGDA
AVHQRIASLPIEVQDVSLLDRITDKESGEQLSKMVDDACMLLADYNGRLAAEIDDRKQLT
RMLSDFLRCQKEFLAEKEHKLEEYKRKLARVSQVRKELRSRIQNLPDLSRLPNVTGSHVH
LPFAGDIYSDD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcattctcggaggcggcgctggagcggaagctgtcggagctgagcaactcgcag
cagagcgtgcagaccctgagcctgtggctcatccaccaccgcaagcactcggcgctcatc
gtcagcgtgtgggagcgggagctgcgcaaagcaaaaccaaataggaagctgacattcctg
tacttggccaatgatgtcatacagaacagcaaaaggaaaggaccagaatttacaaaagac
tttgctccagtaatagtggaggctttcaagcatgtttcaagtgagtctgatgagagttgt
aagaaacaccttggtcgagtgctatctatctgggaagaaaggtctgtttatgaaaatgat
gtattagaacaacttaggcaagctttgtatggagacagaaaggtgagaaagcgcacatat
gaccagataaaagttgatgaaaataactgttcacctcgaagctctcccactgatcctcct
cagaccacagatctcattagagcattacaagaactagaaaacgctgcctctggggatgca
gcagttcaccagagaatagcttccttgcctatagaggtccaggatgtgtccctgttagac
agaataacagataaggaatctggagagcaactttccaaaatggtagatgatgcatgtatg
ttactggcggattacaatggcaggttggcagctgaaatagatgatagaaaacagctaact
cgaatgttatcagactttctccgatgtcaaaaagagttccttgcagagaaagaacataag
ctggaagagtacaaacgcaagttagccagagtgtcccaagtacggaaagaactcaggtca
cggatccagaacctgcctgatctctctcgacttcccaacgtcacgggcagccacgtacac
ctaccgtttgcaggagacatctacagcgatgattga
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