Aphelocoma coerulescens (scrub jay): 138104900
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Entry
138104900 CDS
T10543
Symbol
IRX2
Name
(RefSeq) iroquois-class homeodomain protein IRX-2
KO
K24889
iroquois-class homeodomain protein IRX
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138104900 (IRX2)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
138104900 (IRX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
BUD22
Motif
Other DBs
NCBI-GeneID:
138104900
NCBI-ProteinID:
XP_068860319
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All DBs
Position
2:complement(102445667..102451387)
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AA seq
478 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPAYGASALAAPRSEELARSSSGSAFSPYPGSAAFTAQAAA
TGFTSPLQYSTDPATGFPSYMGSPYDAHTTGMTGAISYHPYGSPAYPYQLNDPAYRKNAT
RDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAP
RNKSEDEDDDEGDGARSKEESPEKMPESNETSAEDEGISLQVDSLTDHSCSAESDGEKLP
CRAGDPLCESGSECKDKYEDIEEEDEDEDEDEDEDIEEDDGGGGERDPPAKPATSSPLAA
VEAPLLGHPHADAARSASKAALGPRASPGPPTPASKPKLWSLAEIATSDLKSQTLGQGCQ
AAPLSSATPASAPHSAAYSPSSLLGRHIYYTSPFYSNYTNYGNFNALQSQGILRYSSSAV
ASNEGLSQTVLNASSVHKQSSDSLKTITNQLEQHYRPSSYDSKKDATEVCTVGVQPYL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagccccccggctcgctggctctgtactcctgc
ccggcgtacggggcgtcggcgctggcggcccccaggagcgaggagctggccaggtcttcg
tcgggatcggcgttcagcccttacccgggatcggcagctttcaccgcccaggcggcggcc
acaggcttcaccagcccgctccagtactccacagaccccgccacgggattcccctcctac
atgggctccccttacgatgcccatacgacggggatgaccggagccatcagctaccacccg
tacggcagccctgcctacccctaccagctcaacgaccccgcgtacaggaagaacgccacc
cgcgacgccacggccacgctgaaggcctggctgcaggagcaccgcaagaacccctacccc
accaagggcgagaagatcatgctggccatcatcaccaagatgaccctcacccaggtctcc
acctggttcgccaacgcccgccggcggctcaagaaggagaacaagatgacctgggcccct
cggaacaagagcgaggacgaggacgacgacgaaggcgatggggcgaggagtaaggaggag
agccccgagaagatgcccgagagcaacgaaacctccgcggaggacgaagggatcagcttg
caagtcgactcgctgacggaccactcctgctccgccgaatcggacggcgagaagctgccc
tgccgagcgggcgaccccctctgcgagtcgggctcggagtgcaaagacaagtacgaggac
atcgaggaggaggacgaggacgaggacgaggatgaggacgaggacatcgaggaggacgac
ggcggcggcggggagcgcgacccgccggccaagcccgccacctcctcgccgctggcggcc
gtggaggccccgctcctcggccacccgcacgccgacgccgcccgcagcgccagcaaggcg
gcgctgggcccccgcgcctcccccggccccccgacgccggccagcaagcccaagctctgg
tctctggccgaaatcgccacctcggacctcaagagtcagaccctgggccaaggctgccag
gctgcgccgctctcctcggccacccccgcctccgccccgcacagcgctgcctactcgccc
tcctccctcctggggaggcatatttattacacctcacctttttatagcaattatacaaac
tatgggaactttaacgctctgcagagccagggcatcctgagatacagctcctcagcagtg
gcttcaaacgagggactaagtcagactgtcctaaatgccagctctgtccacaaacagagc
agtgactctttgaaaacgatcactaaccagctagaacaacattataggccctctagctat
gactctaagaaagatgccactgaagtctgcacagtaggagtacaaccatacctatag
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