Aphelocoma coerulescens (scrub jay): 138104954 Help Entry 138104954         CDS       T10543                                  Symbol RTTN Name (RefSeq) rotatin isoform X1   KO K16484   rotatin Organism acoe  Aphelocoma coerulescens (scrub jay) Brite Cilium and associated proteins [BR:acoe03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    138104954 (RTTN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Other DBs NCBI-GeneID:  138104954 NCBI-ProteinID:  XP_068860454 LinkDB All DBs Position 2:109894726..109974301 Genome browser AA seq 2231 aa AA seqDB search MELSSLVRKLGHELTEIRERSLKTILFKLDHNLISYADLVHEKALFRNLLEWFNFPVVPV KEEVLNFVNSLIKHPPAAQKMIGIGAVEFFSQLRSDVDPNLQAIIDGIVDGLFFLPSELP SSSLSVCYQAQAQPSVDQPVLPQEELFTGYFCQSRSHLPQLQIPPKRTVVKCLKFSTFPW LTLTSTDRHVLSSNESSLRSNNQSLIWSTCELLQDVIMQDFPAEIFLQRPKIVQSLLSLL NLAFGGDGRHQLALQSVSCLQQLCIFLRRRLNFHRDPSFSSSEQGTASQNSSISYCQEAR GAPRSQNPSPGSSSPRPFVIGRTVQRPRGDGQDWDAVSSSGNSTQANANSRISLHSPFDV GHTDLPDIDNEDTLELQMKQLSLPQFCVSILENAIPLLRTGSRRVTMEVLELLVEDMFLI GDAISENVWEDDSLFALELKDKLLLVLGLLGETILYHKSNISAEQPKVMLVHHRMAFISV SLFTVRLLQILLPVEKASKVTQKSLLNALFLLSLDMSFSLEYPSIHESVAAYLEQMSTEN YSIYKQVSEAAYSIECTCSFMVEVRKEGDKNLSELLELADQALSSLPFHLHFPLLQECVH ICSNIWKSAKANSLLQAEGQKLLLHLLSHPLLNIKAEAYHCCLEVVKDCLGIHNIAKPVP SICQGVHFLLHPKVLYEICTFGLQEDKNEVNSTAKTILIHLLQGQLMMEVLTWNKFIEAL FSVLPVLQGYADTKDTLGKCILSLSETTSDKGEGVLPRTPRLQAALRLLFSKKQLVRSVA AKHLAFHLLNEEGASLKRPPLDGDVLSSISNLFIVEGAVELKMNDKMDSIIKAETVEKLY EILTSDAVDLVLRKSAAEQLVVILEDTKMHDIVKKLGVKEKILAYLNECVHVDGKLMESI VLPCLTLLRKIVSVDPVVRLSLAQQPSLLLLLFRVSLILQSDRAVLTETAVLLCLLLFDE VARTETWADGIASNYTEVPAFSLPVAVVRRYHLPVRITGHHVVSPNTVVIPLSSECLTMK PVSDMLKTAWNLSWYHGIENLLQLINYEKEAETFLDSLKLSSEDILILKITHTNYGLQDC LSLIIQAASHSDVRTSLTRLSFYVLNDRLALKCSSGPFGTTLKSFDWQKAMNRFLQVLPA SVEDEKLLVDVLRFLNKLLREQKSNLESDHLKWILKSFLKNQPKSLLGLLVRTESQVQDE MDETQAAVRQRLDKELIRLFNMLLVCSVSVTDREGLELSGSFRTELALKLLQCLRLTDAP HFYGLPSLERTLQGMVHVTALPGWSTYSAEVEPVTICKKYLTGLLEVISSFYVEWGGNAM SFMGKGVTKSTVLCLLHLSHEMMAQAKDTDWISLWSLPYDNSEEQVLSHLGLAWLVPLWV DRDPEVRFTALGIGSALTSLEKGCIALGESCQNISGGLWGTVINILLDQSECSMVRREAA FILQNLLVIPIPTEDLKDCIWQGPCVHDEESGLSQTGIPALKALLYHCQFYEQVNQMVKH CYLGCYMFDLNSYKEDNLNIEKGGVTDFDDSLNLWKAPPSQSKSSHSHSTSETMILSASP SLGSVTELQATVPSSASFIPETVVDRLTAQGQSDTTITESPSEHDSPMSAALSKQRAVVT PALLSAVCSLLHNLLVVMPKDTGIALQQTHLLTTLSSLVSASLVERCILELKAPLGHRCH TEHVKAQVLLLLQYMSSVSRLLKSCLLVDSHLVSQDELLKPLLGNTFKILTIRPKDGLDT ELTSVLYETWVDFFSFLATLLWKSGQISFPSVTAALANHCAAIIDTISDCIHLSTTYPAL YVASLQFLSVLLNEEGRKQLQDKQSVCQNPTISFLLDHTEGCQAPVTQLTALIIQVCERK SSKDGLKEVATNALLSLLAVSKNAQKCALKADLIDSCIENMKHIHAQLNLVSLKPGKAQR KKEDNLIKELRCSMQLLRNCLFQNEECKMAVLKTHLVPVLHSLWPWFLADDSSMQIALHL LCVYTANYPAGCASLCWASGGQSLLPSARSAAGNSLMHNILKLASHVSNDNSPVQQVVFC LISNLALSHDCKGIIQKSNFLQNFLSLSLPKGSNKNSSNVSTLWLKLLLNISFGEDGQQM VMKINGFLDQIIEMCKYKHKSSQYLALLILHNICFSPANKPKILGNDQAIAVLSACLESN SPAVQRIGAASLWALLHNYQKAKVTLKNPSIRRKIDEAYSLVKKSSPQPEENELHAYHVK CLENVVQLLDC NT seq 6696 nt NT seq  +upstreamnt  +downstreamnt atggagctgtcgtcgctcgtcaggaagctcggtcatgaactgacagagataagagagcga tctctgaagactattctgtttaaattagaccacaacttgatttcctatgctgatctggtc cacgaaaaagcgctttttcgtaaccttttggagtggttcaatttcccagtcgtaccagta aaagaggaagtattaaattttgtgaacagtttgatcaagcatccacctgctgcccagaaa atgattggaattggtgcagtggaattcttctctcagcttcgctctgatgtggatccaaac ttgcaggccataattgatgggattgtggatggactgttttttcttccttctgaactccct tctagttctttatcagtatgttatcaagctcaggctcagccttcagtagatcaaccagtt ctgcctcaagaggaattattcactggatatttttgtcaaagtagaagtcatctgccacag ttacaaatacctcccaaaagaacagttgtgaaatgcttgaagttttccacgtttccttgg ctaactctgacttcaacagatagacatgttctttcatcaaatgaaagctctttgagaagt aacaaccaaagtttaatttggagtacatgtgagcttcttcaggatgtgattatgcaagat tttcctgcagagatcttccttcaaagaccaaagattgtacagagccttttatctctgcta aacctggcttttggaggagatggaagacaccagttggctttgcagtctgtgtcatgcttg caacagctctgcatcttcttgagaaggaggcttaacttccatagagatccaagtttttct tcctcagagcagggtacagcttctcagaattcatctatatcttactgtcaagaagcaaga ggtgctcctcgttctcagaatccatcacctggaagtagtagccctcggccctttgtaatt ggacggacagttcagcgtcctagaggagatggtcaagattgggatgcagtatcttctagt ggaaacagtactcaagcaaatgcaaactccagaatctctctgcattccccgtttgatgta ggacacactgacctaccagatattgataatgaggacactttggaattacagatgaagcag cttagcctccctcagttctgtgtttccatcttggaaaatgcaatacctcttctgagaaca ggcagtaggagagtgacgatggaagttcttgaattgcttgtggaagacatgttccttatt ggtgatgctatttctgaaaatgtttgggaagatgacagcctttttgcattggaattgaaa gacaaattgcttctggtcctgggtttgcttggagaaactatattatatcacaaaagcaat ataagtgcagaacagcccaaggtgatgctggtgcatcacagaatggcatttattagtgtt tcactcttcactgttaggttgctccaaatacttctccctgtagaaaaggcgagtaaagtt acacaaaagagtttgctgaatgctttattccttctctcactggatatgtccttctccttg gagtacccaagcattcatgaatccgttgcagcctatctggagcagatgagtactgagaac tacagtatttataaacaagtttcagaagctgcatattcgattgaatgcacttgtagcttt atggttgaagtgcgtaaggagggggacaagaatctttctgagttactagaattggcagat caggccttgagtagtctacccttccacctacactttcccttgcttcaggaatgcgttcac atatgctcaaatatctggaagtctgccaaggccaactcattgcttcaggcggagggtcag aagttgcttctccatctattgtctcatcctttgttgaatataaaagctgaagcctatcac tgctgtttggaagtggttaaggactgtttaggtattcataatattgcaaagcctgtgcct tcaatctgccagggagtacattttcttctacaccctaaagtgttatatgaaatctgtaca ttcggccttcaggaagataagaatgaggtgaactctacagccaagaccattctgatacat ctgttgcaaggacagttaatgatggaagtattaacttggaacaagtttattgaggccctc ttttctgtccttcctgttttacagggttatgctgacactaaagatactttaggtaaatgc attctctctttgagtgaaacaacctctgacaaaggagagggtgttctcccaagaactccc agactgcaggctgctctgcgccttctcttctcaaaaaaacagctggttcgttctgtagca gccaaacatttagcatttcatcttctgaatgaagaaggggcaagtctgaaacgcccacct ctggatggtgatgtcctttccagcatttcaaacttatttattgtagaaggagctgtggag ctaaaaatgaatgataaaatggactcaataattaaggcagaaactgttgaaaagctgtat gaaatcttgacttctgatgctgttgacctagttttacggaagtctgcagctgagcagctg gttgtcattttagaagataccaaaatgcatgacattgtgaaaaagttgggtgtgaaagaa aagatattggcttaccttaatgagtgtgtacatgtggatggcaagcttatggaatccata gtgttgccatgtctgacactcctacgcaaaattgtgtctgttgacccagttgttcgcctg tccctagcacagcagccttctttactgcttttgctgttcagagtttccctgatactacaa agtgatcgtgctgttttaactgaaactgcagtattgctttgtcttctgttgtttgatgaa gtagcaagaacagaaacatgggctgatggcatagccagtaattatactgaggtacctgcc ttcagtttacctgttgctgttgttagaaggtatcatctgccagtcaggatcactggtcat catgtagttagccctaatactgttgtgataccattgtcttctgagtgcttgactatgaaa cctgtgtcagatatgcttaagacagcctggaatctgtcatggtaccatgggattgaaaac ctactgcagctgataaattatgagaaggaagcagaaacatttttagattctctgaaactt tcctcagaagacattcttatattgaaaataactcacacaaactatggactgcaggattgt cttagtttgatcattcaggcagcatcccacagtgatgttaggacgtctctcactaggctt agcttctatgtcctgaatgacagacttgcattaaaatgcagttctgggccttttggaacc actttgaagagctttgattggcagaaagcaatgaacaggtttctacaagtgcttccagct tctgtggaagatgaaaagcttttggtagatgtcttaagatttttaaacaaattgcttaga gagcagaaatcaaatctggagtcagaccatctaaagtggatcttgaaatcatttcttaaa aatcagccaaaatcccttttgggcctcctggtacgaacagaatcccaagtgcaagatgaa atggatgaaacacaggctgctgtcaggcaacgactggataaagaactcattcgtcttttt aacatgttgctggtttgttccgtgtcagtgactgacagagagggcttggaactttctggt tctttcagaacagagctggctctgaagctgcttcaatgcttaaggctaacagatgcacca catttttatggacttccatcactggagagaacattacaaggaatggttcatgttactgca cttccaggctggagtacctattctgctgaagttgaacctgtcacaatttgtaagaaatat ttaactggtcttcttgaggtcatctcatcgttttatgttgaatgggggggaaatgccatg tccttcatgggaaaaggtgttacaaaaagcacagtcctttgcttgcttcacttatctcac gaaatgatggctcaagccaaagatacggactggatatctctttggtctttgccttatgat aatagtgaagaacaagttctgtctcatctaggtctggcatggctggttcctttatgggta gatagagatcctgaggtcaggtttacagcacttggaataggatcagctcttacatctctt gagaaagggtgtattgctttaggagaaagctgccagaatatttcaggaggcctgtgggga acagtgatcaacatccttctggatcaatctgaatgtagcatggtacgcagggaggctgct tttattctgcaaaatctacttgtgattccaattcctacagaagacttgaaagattgtatt tggcaaggcccttgtgtacatgatgaagaatctggcctctctcagacaggaatacctgca cttaaggcccttttgtatcactgccagttctatgaacaggtgaatcagatggtgaaacac tgttacctgggatgttacatgtttgatttgaattcttacaaggaagacaacctcaacata gaaaaaggtggtgtaactgattttgatgattctcttaatctttggaaggctccaccgagt cagagcaaatcttcacattctcactcaacatctgaaactatgattctgtctgcatcacca tcactggggagtgttactgagcttcaggcaacagttccaagttcagccagttttattcct gaaactgtagttgatcggcttactgcacaaggtcaaagtgatacaaccataacagaatct ccaagtgaacatgattctcccatgtctgctgctctgtctaaacaacgtgctgtagtcaca cctgcccttttgtcagctgtttgcagccttctgcacaatttgctggttgtcatgccaaaa gatactggaattgctcttcaacaaacacatttgctaacaactctcagcagtcttgtaagt gctagtctggttgaaagatgtatcttggaactgaaagctccattgggtcatcgatgtcat acagaacatgtaaaagctcaggtcttgttactacttcagtacatgtcatctgtgtccagg cttctaaaatcatgtttattggtggactctcatcttgtaagccaggatgaactgttgaaa cctctcttggggaataccttcaagattctcaccatacgccccaaagatgggttagatacc gagttaacgtctgtactttatgaaacatgggtagacttcttcagctttctagctacatta ctgtggaaaagtggccagatatcttttccatctgtgacagcagcccttgcaaatcactgt gcagcaataattgataccatttctgattgtattcatctgtctaccacatatcctgcttta tatgtggctagtttacagttcctctctgtccttttgaatgaggaaggaagaaaacagctc caggataaacagagtgtgtgtcagaatccaactattagctttcttctggatcacactgaa ggatgccaggcaccagtaactcaacttactgcattaattattcaggtctgtgaaagaaaa tcttcaaaggatgggctgaaagaagttgctacaaatgcactgctgtccctgttagctgtc agtaaaaatgcccagaaatgtgctttgaaagctgacctgatagacagctgtatagaaaac atgaagcacattcacgcgcagctgaatttggtttccctaaagcctgggaaagcacagaga aaaaaggaggataaccttattaaggagttaaggtgttctatgcagctccttagaaactgc ctctttcaaaatgaagaatgcaaaatggcagtactcaaaactcatcttgttcctgttctg cattctctatggccgtggtttttagcagatgactcctcaatgcaaatagctctgcatttg ctttgtgtctacactgcaaactatcctgcaggttgtgcttcactttgttgggccagtggt ggacaatcattacttccgtctgcacgaagtgcagctggcaattcattaatgcataacatc ttgaaattggcttcccatgtgtcaaatgataacagcccagttcagcaggtggtcttttgt ctaatatctaaccttgctctgtctcatgactgtaaaggcattattcagaagagtaacttc ctgcagaactttttatctctttcattaccaaaaggaagtaataaaaattccagtaatgtg tctactctctggctaaagctgctactgaacatatcttttggagaagatggacaacagatg gtcatgaagataaatgggtttttagaccagatcattgaaatgtgtaaatacaagcacaag agcagccaatatctagcacttcttattctacataacatatgttttagtccagctaataaa ccaaagatactaggtaatgatcaagcaattgcagtactgtctgcctgtttggaaagtaac agtcctgctgttcagagaataggagcagcttcgctttgggctttgcttcacaactatcag aaggcaaaagtgactttgaagaatccatccataaggagaaaaatagatgaggcttattct ttagtgaagaaaagttctccccagccagaagaaaatgaactacatgcctaccatgtaaaa tgcctagagaatgtagtgcagcttcttgattgttaa

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