Aphelocoma coerulescens (scrub jay): 138105011
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Entry
138105011 CDS
T10543
Symbol
TGIF1
Name
(RefSeq) homeobox protein TGIF1 isoform X1
KO
K19383
homeobox protein TGIF1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
138105011 (TGIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138105011 (TGIF1)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
138105011 (TGIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Homez
Motif
Other DBs
NCBI-GeneID:
138105011
NCBI-ProteinID:
XP_068860635
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All DBs
Position
2:complement(117294280..117304714)
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AA seq
292 aa
AA seq
DB search
METMKGDRREGELLRGAMGLGFAWHKLKGVVAISGSETEDDDTMDVPLDLSSSAGSGKRR
RRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSRQTHLSTLQVCNWFINARRRLLPDM
LRKDGKDPNQFTISRRGTKLPEGGLVESAISTKNYIPLLEETAFLPAAAPLGKTVSSSKS
ASPGSVLARPSVICHTTVTALKDAPFHFCQPADVGQTTDLQQPPAGGFTDNALSCHEDAS
KLGPGANTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLMA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaatgaaaggtgacaggcgggagggagaacttttgagaggggccatgggcctg
gggtttgcgtggcacaaattaaaaggtgtagttgcaatatcaggcagtgaaacagaggat
gatgacactatggatgtcccactggatctttcctcatctgctggctcaggcaaacggcgg
agacgtggcaacctgcccaaggaatctgtgcagattcttcgggactggctctatgagcac
cgatacaatgcttatccttcagagcaagaaaaagcgctgctatcccgacaaacacacctt
tccacactacaggtctgcaactggtttatcaatgcacgccgcaggctgttacctgacatg
ctgaggaaggatggcaaagacccaaatcagttcactatctcgcggcgagggaccaagctt
cccgagggcggcctggtggagtctgccatcagcacaaagaactacattcccttgctggag
gagactgccttccttcccgctgccgcaccgcttggcaagactgtgtcctcttccaagtcg
gcttccccgggatcagtcctggctcggccgtcggtgatttgccacacgactgtgactgcg
ttgaaagatgcccctttccacttttgccagccagctgatgtaggccagaccacggacctg
cagcagcccccggccggtggcttcacagataacgccctctcctgccatgaggacgcatct
aaactgggacctggtgcaaacacacaaagtgggctctttaacactcctcctccaacacca
ccagaccttaaccaggattttagtggatttcagctactggtggatgttgcactcaaaagg
gcggcagagatggagttgcaggcgaaacttatggcctaa
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