Aphelocoma coerulescens (scrub jay): 138105055
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Entry
138105055 CDS
T10543
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138105055 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138105055 (SS18)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138105055 (SS18)
GBAF(ncBAF) complex
138105055 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
138105055
NCBI-ProteinID:
XP_068860740
LinkDB
All DBs
Position
2:complement(120669162..120713330)
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AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMSQSGPPPPPRSHNMSSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQAGSQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPQQQGYPPQQQQYPGQQGYPG
QQQGYGPSQSGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgttcgcggccccgaggcagcggggcaagggggagatcacgccggccgcc
atccagaagatgttggatgaaaacaaccatctcattcagtgtataatggactatcagaac
aaaggaaagacttctgaatgctctcaataccagcagatgctgcatacaaacttggtttac
ctagccactatagctgactccaaccagaacatgcagtctctactaccagcaccacccaca
cagaatatgcctatgggtccgggcgggatgagtcagagcggccctcccccacccccgcgc
tcgcacaacatgtcttcagatggtatggtaggtgggggccctcctgcaccacacatgcag
aaccagatgaacggccagatgcctggacccaaccatatgcctatgcaaggacctggacct
aaccagctcaatatgacaaacagttccatgaatatgccttcaagtagccatgggtccatg
ggtggctataatcactcagtgccatcgtcacagagcatgccagtgcagaatcagatgaca
atgagccagggacagccaatgggcaactatgggcccagaccaaacatgaatatgcaacca
aaccaaggtccaatgatgcaccagcagcctccctcccagcaatacaacatgccacaggca
ggtagccagcattaccaggggcagcagccaccgatgggaatgatgggccaagttaaccaa
ggaaatcacatgatggggcagagacagattcctccatacaggccaccacagcaaggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaactcgcaatatggtcagcagcaagatgcatatcaaggaccaccc
caacagcagggttatccaccacaacagcagcaatatcccggccaacaaggctatccagga
caacagcagggttatggcccctctcagagtggtccagggcctcagtatcctaattatcca
caaggacaaggacagcagtatgggggatacagacccacacagcctgggccaccacagcca
ccacagcagaggccttacggatatgaccagggtcaatatggaaattatcaacagtga
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