Aphelocoma coerulescens (scrub jay): 138105056
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Entry
138105056 CDS
T10543
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03022
Basal transcription factors
Brite
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138105056 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
138105056 (TAF4B)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
138105056 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138105056
NCBI-ProteinID:
XP_068860743
LinkDB
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Position
2:120732353..120806354
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AA seq
836 aa
AA seq
DB search
MSTSAAPVRLMPGGHPEQAAACAPAAGSAPDRGSPAAAVPGGPAPAAAPPRPVAAPAGTP
VARGAAPGVPRPVAPKGPATATLQLPANLQLPPGTVLIRSSNGHLMLVSQQATARAQNQT
QNNTSVRPSVPTSTPAVRICAVQNAGTQLVKKIAAAPVKTLSQTTNAVVSTVQTPAVIQP
AAATASVTTVTAVKPLSTGTPVKLPVTGPPAQAISQKAVSVKAEGTTVAQTSASTEMLEN
VKKCKNFLATLIKLASSGPQAPEMGQNVKNLVQNLLEAKIEPEEFTKKLYIELKSSPQPY
LVPFLKKSVLALRQLMPNPQSFIQQCMEQPAPTQEVISTCTSAVPAPSTGVATSAVATTA
LPAVKPMPASAAVTAPLVITPLLATTSTAASVQPVKAVPSSAVVTASLGPAASVLTTTMA
PSRLTAVQPGKPVFTSAVPAPSLQSAKQVLVSTAASSATAPLRPLKPVIGTPLGVKISQP
SSIVAQPVGAQQVVKVKQLVVQQPSGTIVKQVSTLPQPSVLTLQTSAEKKMLLNTLVQTN
QFPAGSILKQITLPRNKILSLQASPVQKVKMKENGATSFRDEDDINDVTSMAGVNLNEEN
ACILSENSELIGTVIHSCADEPFLSPEALQCKILNIGKRHDIMELNSDVVNLISHATQER
LRGLLEKLTVIARHRVSTHKGSDTYIVCSDTRAQLRFLEKLDHLEKQRKDEEEREMFLRA
AKSRFNKEDPEQLRLKQKAKERQQLELAQMQQREANLTALAAIGPRKKRPLDSSNVGSGL
EGLNGNGIAPGSSGFSLTKQMLCPRVTRVCLRDLIFCMEQEKEMKHSLHLYRALLK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctcggcggctcccgtcaggctgatgcccggcgggcacccggagcaggcggcc
gcctgcgccccagccgcgggctcggcgcccgaccggggcagccccgccgccgctgtgccc
ggcggccccgcgcccgctgccgccccgccgcgcccggtggccgcccccgcggggaccccg
gtggcgcggggggccgctcccggcgtcccgcggccggtggcgcccaaggggccggccacg
gccaccctccagttgccggccaacttgcagctgcccccaggaactgttctcatcagaagc
agtaatggccacctaatgctggtatctcaacaggcaacagcacgagcacagaaccagaca
caaaataacacaagtgtgagaccatctgtgccgaccagcacacctgcagtcagaatatgt
gctgtgcagaatgctggcacacagttagtaaagaaaatagcagctgctcctgtgaaaacg
ttatctcaaacaacaaatgccgtggtttctactgttcagacacctgctgtaatacagcca
gcagctgcaacagctagtgttactacagttactgctgtaaagcctttgagtactggaaca
cctgtaaaacttccagttacaggaccacctgcacaagctatctcccaaaaggcagtctct
gtgaaagcagagggcacaacagtagcacagaccagcgcttctacagagatgctagagaat
gtgaagaaatgcaagaattttcttgctacactaataaaattggcatctagtggacctcaa
gcccctgaaatggggcagaatgtgaagaatctggtgcaaaatctattggaagcaaaaatt
gaaccagaagaatttacaaaaaagctgtacatagagctaaagtcgtctccgcaaccatac
ttagttccttttctcaagaaaagtgtgcttgccttacggcaactaatgcctaatcctcag
agctttatccagcagtgtatggagcaaccagctccaactcaagaagtgatttcaacttgt
acctctgcagtaccagctccttcgacaggagtggcaacctcggctgtagcaacaactgct
cttccagctgtaaaacccatgcctgcctctgcagcagtcacagcccctctggttatcacc
ccactccttgccaccacgtcgacagcagcttctgtgcagcctgtgaaggctgttccttcc
tctgcagtggtgacagcatctcttgggcccgcagcttccgtcctcaccacaaccatggca
ccgtccaggctgactgctgtccagcctggcaagccagtcttcacctctgcagtgccagcg
ccctctctccagtctgcaaagcaagtgctggtctctactgcggcatcttcagcaacagcc
cctctccggcctctgaaaccagtcattggaacgccactcggtgttaaaatctcgcagccc
agctccatcgttgcacagccagtgggtgctcagcaggtggttaaagtgaaacaactggta
gtccagcaaccatcaggaaccattgtaaagcaagtatccacgctcccacagccgtcagtg
ctcaccctacagacatctgctgagaaaaagatgctgctgaatacacttgttcaaaccaac
cagtttcctgcaggttccattctgaaacaaattacactgccaagaaataaaattctgtcg
cttcaagcatcgcctgttcagaaagtgaaaatgaaagagaatggagcaacatccttcaga
gatgaagatgacataaatgatgtgacttctatggctggagttaatctcaatgaggagaat
gcgtgcattttgtcagaaaactctgagctcattggcacagtgattcactcttgtgcagat
gaaccgtttctctctccagaagctcttcagtgtaagatcttgaatataggtaaaaggcat
gacattatggaacttaactctgatgttgtgaacttgatctcccacgctacacaggagaga
ttacgagggctcctagaaaaactaactgtaattgctcggcacagagtatcaacccacaag
gggagtgatacgtatattgtatgtagtgacaccagagcacaactgagatttcttgaaaag
cttgatcacctagaaaagcagagaaaagatgaagaggaacgtgaaatgtttcttcgagca
gccaagagccgtttcaataaagaagatccagagcaactgcggttaaagcagaaagcgaaa
gagaggcaacagttggaattagcacagatgcaacaaagagaagccaacctcacagctttg
gcagccattggaccaaggaagaaaagaccattggattcatcaaatgttggatctgggctc
gagggtttgaatggcaatggaattgctccgggatcatcaggttttagccttacgaagcag
atgctctgtccaagagtaacccgtgtctgtctcagggacttgatattctgcatggaacaa
gaaaaggagatgaagcattctctacacttgtaccgtgctcttctgaagtga
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