Aphelocoma coerulescens (scrub jay): 138105062
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Entry
138105062 CDS
T10543
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04382
Cornified envelope formation
acoe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138105062
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
138105062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acoe04515
]
138105062
Cell adhesion molecules [BR:
acoe04515
]
Cadherins
Major cadherins
138105062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
RibLong
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
138105062
NCBI-ProteinID:
XP_068860761
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Position
2:123350049..123373703
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AA seq
1128 aa
AA seq
DB search
MARGPAAAVRLLALLICLNYGDGLYVKVYNGNYRSGVLSHPNSLIRQKREWTVPPAFIRE
EEDNSYKNPIARIHSDLEDTGIVVTYTISGQGVTEPPYGLFVINGKTGDLNITGRVDREK
TPILLVRGHALDKNGAKLEEPIDLPIKVVDINDNSPVFSHEVFVGSIEELSETGTIVMRI
NATDADEPNNLNSKIAFRIVSQSPSAAFSMDKNTGEVRVAKINLDREAQSSYSLVVEAKD
RGGEIGGNAATCSLEIKILDVNDNLPVVESHTFEGSIEENRANVEIMRIKVFDKDEEFSD
NWLANFTFVSGNEDGFFQIVTDTQTNEGILTVVKELDYEKMQSLNLGVVVTNKAEFHKSI
KPSYKAETIPIKINVINVREGPVFPGGTKIIEASEKLQIKQVIGQYQAYDEDTGKIAEHI
TYMKGKDAANWITVDSVTGEIRLAKNLDYESPHVVNGTYTITMLGVTTDSPKKTVTGTVV
IQVKDENDNCPVIVNPVQTVCSDTKLVDVTARDLDGYPNSYPFSFTVIDEPQGTAEKWII
ASGNDTSVQLVPQNLKPGRTEVPMLIKDFQGVSCAVPQSLQLTVCECADDGVCQEKFIGA
KSVGLGPAAVALIILAFLLLLLVPLLLLLCPGGLGAKGFSGAKTFADIPDHSEAMLREWN
SEGAAPEEKPVLSFIPPTALGNLRGAATAAAAGAAGAAAAAGMSGEETVIGAGSSASHVG
EHHSTITRERWEEQRRLLSGANYGAMAAGAAEGMTGTDSKTVVSGGGVAVGAAGAMNEEF
LRDYFNDKAVSFADEDEEQAAKDCLLIYSQGESGSPHGSVGCCSFIEGDLDDHFLDDLGD
KFKTLAEICIGRQINMKDGGSKNESGFGLSEVKSQFLDQQNASSSEQAFASGSHFQSIPP
MHTGSGTGESTLSKEVVTETTFSSSHSGQHNGLHLPTGHAETNVTMTETSYSGGAPAHSA
AVFLDPQRKENVVVTERVLAPASSIQGMVKIPDLPHGSNMVVTERMVKSAGVGPGTLTVQ
DLPDSQYVVVRERERVLVPAAEQGLLSFPASAEERSTVLNERLVTASRLQSRAEQATGAS
SGRQEHTLITDSPLDLMGSDLQGPPPASATLSKSSRVTKYSTVQYTRS
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggggccccgcggcggcggtgcggctgctggcgctgctgatctgtttgaattac
ggagatgggctctacgtgaaggtttataatggaaattacaggagtggcgtgttgtctcat
cccaacagcctaatcagacagaagcgagaatggacagtccctccagctttcatacgggag
gaggaggacaattcctataagaatccaattgctagaatacattcagatcttgaagataca
gggatagtagtaacttacactatatctggtcaaggagtaacagaacccccttatggatta
tttgttatcaatggaaagactggtgacctgaacataacaggaagggtggacagagagaag
actccaattctgcttgtccgaggccacgcactagataagaatggggcaaaactggaagag
ccaatagatctcccaattaaagttgtggacataaatgataattccccagtgttttcacat
gaagtttttgttggttcaattgaagaattaagtgaaacaggtacaattgtaatgaggata
aatgcaacagatgcagatgagccgaataacctaaattccaaaattgctttcaggattgtt
tcccaaagccctagtgctgcattcagcatggataagaatactggcgaggttcgagtagca
aaaataaaccttgacagagaggcacaaagtagctattctttggtggtggaagcaaaggac
cgtggtggtgaaataggtgggaatgctgcaacgtgttctttagaaatcaagattttggat
gtcaatgacaatctgcctgttgttgaaagtcatacatttgaaggaagcattgaagaaaac
agagcaaatgtggaaattatgcgaataaaagtatttgacaaagatgaagagttttctgat
aactggctggcaaacttcacttttgtttctggcaatgaagatggttttttccaaattgta
acagacacccaaacaaatgaaggaattttgactgttgtgaaagagctggattatgaaaaa
atgcaaagcctaaacttgggtgttgttgttacaaacaaagcagagttccacaagtcgatt
aaacccagttacaaagcagaaacaattccaatcaaaattaatgtgatcaatgtgcgggaa
ggccctgtgtttcctggcggcacaaaaattattgaagcaagtgagaaactgcagataaaa
caggttattggacagtatcaagcctatgatgaagacactggaaaaatagcagaacatatt
acatacatgaaaggaaaagatgcagcaaactggatcactgtagactcagtcacaggtgaa
atccgacttgctaaaaatcttgattacgaatcacctcatgtagtaaatggtacctacact
atcaccatgttgggtgtaactactgattccccaaagaaaacagtcactggcacagttgtc
attcaagttaaagatgaaaacgataactgcccagttattgtgaaccctgtgcagacagtg
tgttcagatacaaaactagttgatgttacagctcgtgatttggatggttacccaaacagt
tatcccttcagctttactgtcattgatgagccacaagggacagcagaaaaatggataatt
gcatctggaaatgacaccagcgtacagttggtaccacaaaacctgaagccaggcagaact
gaagttcccatgctaataaaagacttccaaggggtcagctgtgctgtgccacagtcactg
cagctgactgtttgtgagtgtgcagatgatggagtatgccaagagaagtttattggcgcg
aagtcggtgggtctgggaccagcagcggttgcactaatcatcttggcatttttacttctg
ctgcttgttccactgttactgctgctgtgtcctggtggcttgggagcaaagggattcagt
ggagcaaagacatttgctgacataccagaccacagcgaagcaatgttgcgtgagtggaac
agtgaaggagcagctccggaggagaagccagtgctaagcttcattccacccactgcactt
gggaacttgagaggagcagcaacagcagcagcagccggagcagctggagcagcagcggca
gcaggaatgagcggagaagaaactgtaataggagcaggtagctctgcctctcacgtagga
gagcatcacagcactattaccagggaaagatgggaagagcaaaggcgtcttctttctggt
gccaactatggagccatggcagctggagcggctgaaggcatgacaggtacagacagcaag
acagttgtgtctggaggaggagttgctgtgggagcagcaggagccatgaatgaagaattc
ttaagagactacttcaacgacaaagctgtctcttttgcggatgaagatgaagagcaagct
gcaaaagactgtctcctgatttattcccagggagaatcaggctccccgcacggctccgtc
ggctgctgcagctttattgagggggatcttgatgaccattttcttgatgatttaggagac
aagtttaaaactctagcagaaatatgtataggcagacagatcaacatgaaagatggtggc
tccaagaatgaatcaggttttggtctcagtgaagtaaagtcgcagttcttagatcagcaa
aatgcttccagctctgaacaagcctttgcctcaggcagtcatttccaatccatcccaccc
atgcacacaggcagtggcacgggagaaagcaccctgtccaaggaggtggtcacagaaaca
accttttcatcatcccattctgggcagcacaatggcctgcaccttcccacaggccatgca
gagaccaatgtcaccatgacagaaacatcctattctgggggggctcctgcccactcggcc
gctgtgtttttagacccccagcgtaaggagaacgtagtggtgacagagagagtgctggca
cctgcatcgagcattcagggaatggtgaaaatccctgatttgccccatggaagtaacatg
gtggttacagagaggatggtgaagtcagcaggtgtggggccaggaaccctgacagttcag
gatcttcctgactcccagtacgtcgtggtgagggagcgagagagggtgcttgtgcccgct
gccgagcagggcttgctcagcttccccgcttcggcagaggaacgcagcacggtgctgaat
gaaaggctggtgacagcctcgaggctgcagagcagagctgaacaggcaacaggtgccagc
tcaggaaggcaagagcacacgctgatcacagactccccgcttgatctgatgggctctgac
ttacaagggccacctcctgccagtgccacactgagcaagtcttccagggtcaccaaatac
agcacagtgcagtacactcgctcatag
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