Aphelocoma coerulescens (scrub jay): 138105100
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Entry
138105100 CDS
T10543
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138105100 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acoe01009
]
138105100 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138105100 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
acoe03029
]
138105100 (RB1CC1)
Protein phosphatases and associated proteins [BR:
acoe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138105100 (RB1CC1)
Membrane trafficking [BR:
acoe04131
]
Autophagy
Autophagosome formation proteins
ULK complex
138105100 (RB1CC1)
Mitochondrial biogenesis [BR:
acoe03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
138105100 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
138105100
NCBI-ProteinID:
XP_068860838
LinkDB
All DBs
Position
2:complement(127365410..127437828)
Genome browser
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLDSSPEHGGAESEETEDGKSA
ELVLYPDISKVNSKSMLASFCKSVEHSALEGPEPENVKDDKESGQNATVQDNEMSVELKD
DDQPTFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRIES
TTGTAIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTSSCVKDVSAENASLSVCVEKCRVIAQDSKIHLRGIKEDLCHFRTLVQKEQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLNDKHQNELQCLKSEYETKINKLLEDGEENKKKIKKL
KGDLLGLEEVLQTKNNEFAIVKNEKEAVVCLQNEKDQKLLELECQMETQNSEIKELRQSR
EIVLEDLKKLHVENKEQLQLLRAELESLEQSHLKELESNLQARHLQEFEKVVAEHKDCLD
KLKKENQHRLEQMQESHDVVMQEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLRSQIDKETESLKKEIDKLNNKIQISSDEYQVGLSELRTLMTIEKDQ
CISELVNRYEEESNLLRTELNKVTLLHQKTAEAEKRLSEQITELQSKLELETSALEKEKT
EKLSLCEQQEKYEAIIHKLKEEKELLVSNQEQDRQLLIQKLNCEKEDAVQTACKEFELQR
EAAEKGLLERIQQLEMQVNRSPPAESTAESSLVAELQEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVNKLRSSNFSPSTYLAAVSEACGACAADVPTDTDRLVADFGAEGRMD
STMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacgtttgatactgaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtacaagattgctatt
cagcaccaagtactggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacgttttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgcagtgtttcatacagtagcatcacgaacacag
cttgctgtggaaatgtatgaggttgccaagaagctttgctccttttgtgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgccataatggccaacttggaagattgt
acatactcttatcaaaagctgcttttcaagtttgaaaatgtgtattcaagctatttgcag
tccatagatgatatcaaattgaaacttacacacttgggttccgctgtttctatcatggcc
aagataccactgctggagtgcctgacaagacatagttacagagagtgtttaggaagactg
gattcttcacctgaacacggaggagcagaaagtgaagaaactgaggatgggaaatctgct
gaattggtgctttatcctgatatatctaaagtgaacagtaaatcaatgttagcgtcattt
tgcaagtcagttgaacattcagctttggaaggcccagagcctgaaaatgtaaaagatgat
aaggaatctggtcaaaatgctactgtccaggacaatgaaatgtcagtagaattgaaagat
gatgatcagcctaccttcaatgtgtctttgttagactggataaatgttcaagatagacct
aatgatgttgaatccctggtcagaaaatgttttgattctatgagcaggcttgatccaagg
atcatccaaccctttctggcagaatgtcgccaaactatcgccaaactagataatcagaac
atgaaggctattaaaggtcttgaggatagactctatgcattggaccagatgatagcaagc
tgcagcagactggtgaatgaacaaaaagaacttgctcagggatttttggcaaatcagaag
agagctgagaacttgaaagatccttctgtgctacctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcatagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctgcaagtcagactgaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactacaagcactgcttcgtcttgtaacagag
ctcctagaaagggtcaaagttgtagaggctctcagcactgttcctcagatgtactgttta
gctgttgttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaaagatgggaaacatctatatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactctttaggaagtcctttctaaggaatcgtttgtttagaggacttgactcctgg
cctccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctca
ttgagtgacttgcagtttttgcagtctttctgtccttcagaagtacagccattactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctg
gtcaaggcagcacagagtttggatgaaatgtcacaaaccattacagacctgctgaatgaa
caaaaggcctccaatagtcaagcatcgccacaatctgctaccacaccaaggatagaaagt
actacaggaaccgcaattgctacctcttcaagaactcctccatcactcagtcttcagggt
cccctgtgtcctcctgtgtgtcccccagctccattagaagaattgtctccagacagcatt
gatgctcatacgtttgattttgaaactattgcccatccgaacttggagcaagctcttaag
caaggatcattagacttggattcattagcagaaagtccggaatctgactttatgtcagca
gtaaatgaatttgtaatagaagaaaatccagtgtctcctaatgtaataagtgacccacaa
agcccggaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtaga
cgtatgcaagatacaagttcttgtgtaaaggatgtttcagcagaaaatgcttctctcagt
gtttgtgtggagaagtgtagggttattgctcaagactcaaagatacatttaagaggtata
aaggaagatctctgccatttcagaacacttgtacaaaaagaacagtgtgacttttctaat
tctttaaaatgtacttccttagaaatagtaaatacgattgagaaggtaaaactttcactt
gaaaaaacactaaatgataaacatcaaaatgaattacaatgtttgaagagtgaatatgaa
actaaaattaataaattattggaggatggtgaagaaaataaaaagaaaatcaaaaagtta
aaaggtgacctattaggccttgaggaagttcttcagactaagaacaatgaatttgcaata
gtaaaaaatgagaaagaagctgtagtttgccttcagaatgaaaaagaccagaaattactt
gaattggaatgccaaatggagacacaaaattctgaaattaaggaactaagacagtcacgt
gaaatagtacttgaagacttgaaaaaacttcatgttgaaaacaaagagcaactacaactc
ctgagggcagaacttgagagtttagagcaaagccatttaaaagaactggaaagcaaccta
caagccaggcatttacaggaatttgagaaggttgtagctgagcacaaggactgtttggat
aaattaaaaaaagagaaccagcatagacttgaacaaatgcaggaatctcatgacgtagtt
atgcaagagaaacaacaacaagtagaagagttacagctcaaggtttcagatctgtctgat
ttgaggtgcaaattagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaag
cttcttttggaagaaagcagaaaccagcaacaagagaccttaagatctcaaattgacaag
gaaactgaaagcttaaaaaaggagatagataaattaaacaataaaatacaaattagtagt
gatgaatatcaagtgggcttatcagaactaaggactctgatgacaattgagaaagatcag
tgtatttctgagctagtaaatagatatgaagaagaatcaaatttgcttagaactgaatta
aataaagtaacgcttcttcatcaaaaaactgctgaggcagaaaaaagactttcagagcaa
ataacagaactacagagtaagttagagttggaaacgagtgccctagagaaggaaaaaaca
gaaaagttgtctctctgtgagcagcaggaaaaatatgaagctattatccataagctaaag
gaagagaaagaactgttagtatctaaccaagagcaagacaggcagttgctcattcagaag
ctcaattgtgaaaaagaggatgcagtacaaactgcttgtaaagagtttgaattacagagg
gaagcagctgaaaaagggcttttggaaagaatacaacaacttgagatgcaagtgaatcgg
agtcctcctgctgaatcaactgctgaatcaagcttagttgctgaacttcaggagaagctt
caggaagaaaaaatgaagttcttagagcaacttgaagagcaagagaaaagaaagaatgaa
gaaatgcagaacatcaggacatctctcactgcagagcagcagaccaactttaacactgtt
ctggcaagagagaaaatgaaaaaagaaaacataattaatgatcttagtgacaaattaaaa
gtgcttacacaacagcaagaaaaagataaggatttgattgaaacactttctgaagatcgt
gctcgcttacttgaagagaagaagaagcttgaagaagaagttaataaactgagaagtagt
aatttttctccatcaacctacttggcagcagtgtcagaagcttgtggagcctgtgcagct
gatgtgcccactgacacagacagattggttgctgactttggggctgaaggaagaatggac
tccacgatggaaaccagtatgatggctgtgcatgaaaatgtccatatgtctgaagaaaag
cagaggataatgttgttagaaagaactttgcagttgaaagaagaagaaaataagagatta
aatcaaagattgatgtcccaaagcatgtcgtcagtatcctcaagacattctgaaaaaata
gcaattagagattttcaggttggcgatttggttctcattatcttggacgaaaggcatgac
aactatgtgttgtttactgttagtccaaccttgtatttcttgcactcagagtcccttgct
gcattggatctcaaaccaggtgagtgtgcatcaggtgcatctaggagaccttgggtgcta
ggaaaagtgatggaaaaggaatattgccaggcaaaaaaggcacaaaacagattcaaagtt
cctttgggtacaaaattctacagagtgaaagctgtaccatggaacaagaaagtataa
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integrated database retrieval system
