Aphelocoma coerulescens (scrub jay): 138105324
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Entry
138105324 CDS
T10543
Name
(RefSeq) exosome complex component RRP41-like
KO
K11600
exosome complex component RRP41
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138105324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138105324
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138105324
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
138105324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
138105324
NCBI-ProteinID:
XP_068861223
LinkDB
All DBs
Position
2:complement(168972548..168974085)
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AA seq
153 aa
AA seq
DB search
IDVHVQIDVHVQGAVLSQLYPRSQIDVHVQVLQADGGELGASVSAAGLALLDAGVALRGA
VVAGSAGLAESPAGPPVALSDLSAAEEAAGGPRLVVATVAGSGQLALCQLSARLHQERLR
PVLDAAQATCQGLQAVLDGVVRARLRQDTAMEQ
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atcgacgtgcacgtccagatcgacgtgcacgtccagggggccgtgctcagccagctctac
ccccgctcccagatcgacgtgcacgtccaggtgctgcaggcggacgggggcgagctgggg
gccagcgtgagcgcggccgggctggccctgctggacgcgggcgtggccctgcgcggggcc
gtggtggccggctcggccgggctggccgagtccccggccggacccccggtggccctgagc
gacctgagcgcggccgaggaggcggccgggggcccgcggctggtggtggccacggtggcg
ggcagcgggcagctggccctgtgccagctcagcgcccgcctgcaccaggagcggctgcgg
ccggtgctggacgcggcccaggccacctgccaggggctgcaggccgtgctggacggcgtg
gtcagggccaggctgcgccaggacaccgccatggagcagtga
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